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  5. Sacu_v1.1_s1274.g027980

Sacu_v1.1_s1274.g027980


Description : not classified & original description: CDS=82-996


Gene families : OG0008764 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008764_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s1274.g027980
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
Aev_g02156 EIF4B2 not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0003743 translation initiation factor activity IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0001181 RNA polymerase I general transcription initiation factor activity IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006361 transcription initiation at RNA polymerase I promoter IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0140223 general transcription initiation factor activity IEP HCCA
InterPro domains Description Start Stop
IPR001878 Znf_CCHC 227 242
IPR001878 Znf_CCHC 270 287
IPR010433 EIF-4B_pln 19 79
No external refs found!