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Aliases : RBCL
Description : not classified & original description: CDS=1-270
Gene families : OG0002607 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002607_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0313.g027218 | |
| Cluster | HCCA: Cluster_31 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00001p00272640 | evm_27.TU.AmTr_v1... | Ribulose bisphosphate carboxylase large chain OS=Nymphaea alba | 0.06 | OrthoFinder output from all 47 species | |
| AMTR_s00012p00184400 | RBCL,... | Ribulose bisphosphate carboxylase large chain... | 0.07 | OrthoFinder output from all 47 species | |
| AMTR_s00606p00006850 | RBCL,... | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
| AT2G07732 | No alias | Ribulose bisphosphate carboxylase large chain, catalytic domain | 0.02 | OrthoFinder output from all 47 species | |
| ATCG00490 | RBCL | ribulose-bisphosphate carboxylases | 0.14 | OrthoFinder output from all 47 species | |
| ATMG00280 | ORF110A | Ribulose bisphosphate carboxylase large chain, catalytic domain | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g01070 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.12 | OrthoFinder output from all 47 species | |
| Als_g11735 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g06423 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.02G014200.1 | RBCL, Ceric.02G014200 | large subunit of ribulose-1,5-bisphosphat... | 0.09 | OrthoFinder output from all 47 species | |
| Ceric.02G046100.1 | RBCL, Ceric.02G046100 | large subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G074700.1 | RBCL, Ceric.11G074700 | not classified & original description: pacid=50596717... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.11G075000.1 | RBCL, Ceric.11G075000 | not classified & original description: pacid=50595488... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.16G059900.1 | RBCL, Ceric.16G059900 | not classified & original description: pacid=50589806... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z018000.1 | RBCL, Ceric.1Z018000 | not classified & original description: pacid=50586374... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.1Z021900.1 | RBCL, Ceric.1Z021900 | large subunit of ribulose-1,5-bisphosphat... | 0.07 | OrthoFinder output from all 47 species | |
| Ceric.1Z162100.1 | RBCL, Ceric.1Z162100 | large subunit of ribulose-1,5-bisphosphat... | 0.01 | OrthoFinder output from all 47 species | |
| Ceric.29G033400.1 | RBCL, Ceric.29G033400 | large subunit of ribulose-1,5-bisphosphat... | 0.11 | OrthoFinder output from all 47 species | |
| Ceric.35G017400.1 | RBCL, Ceric.35G017400 | not classified & original description: pacid=50581736... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.36G040400.1 | RBCL, Ceric.36G040400 | not classified & original description: pacid=50569251... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.38G006500.1 | RBCL, Ceric.38G006500 | large subunit of ribulose-1,5-bisphosphat... | 0.1 | OrthoFinder output from all 47 species | |
| Dcu_g16071 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Dde_g00694 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08300 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01013856001 | RBCL | Ribulose bisphosphate carboxylase large chain (Fragment)... | 0.06 | OrthoFinder output from all 47 species | |
| GSVIVT01022403001 | RBCL | Ribulose bisphosphate carboxylase large chain OS=Sesbania sesban | 0.04 | OrthoFinder output from all 47 species | |
| Gb_07644 | RBCL | Ribulose bisphosphate carboxylase large chain... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_15502 | RBCL | Ribulose bisphosphate carboxylase large chain... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_18620 | RBCL | Ribulose bisphosphate carboxylase large chain... | 0.02 | OrthoFinder output from all 47 species | |
| Gb_34523 | No alias | Ribulose bisphosphate carboxylase large chain (Fragment)... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_37464 | RBCL | Ribulose bisphosphate carboxylase large chain... | 0.08 | OrthoFinder output from all 47 species | |
| LOC_Os01g58020.1 | RBCL, LOC_Os01g58020 | Ribulose bisphosphate carboxylase large chain OS=Oryza... | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os05g35330.1 | RBCL, LOC_Os05g35330 | Ribulose bisphosphate carboxylase large chain OS=Oryza... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os10g21268.1 | RBCL, LOC_Os10g21268 | large subunit of ribulose-1,5-bisphosphat... | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os11g32770.1 | LOC_Os11g32770 | Ribulose bisphosphate carboxylase large chain OS=Oryza... | 0.06 | OrthoFinder output from all 47 species | |
| LOC_Os12g10580.1 | RBCL, LOC_Os12g10580 | component psRPS15 of small ribosomal subunit proteome | 0.11 | OrthoFinder output from all 47 species | |
| Len_g01809 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g07296 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.09 | OrthoFinder output from all 47 species | |
| Mp3g01300.1 | No alias | no hits & (original description: none) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g16802 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Nbi_g02076 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g01544 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.08 | OrthoFinder output from all 47 species | |
| Pir_g10235 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.05 | OrthoFinder output from all 47 species | |
| Pnu_g02095 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g08990 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g02085 | No alias | large subunit of ribulose-1,5-bisphosphat... | 0.06 | OrthoFinder output from all 47 species | |
| Smo137874 | RBCL | Photosynthesis.calvin cycle.ribulose-1,5-bisphosphat... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc00g500063.1.1 | RBCL, Solyc00g500063 | large subunit of ribulose-1,5-bisphosphat... | 0.1 | OrthoFinder output from all 47 species | |
| Solyc07g021200.1.1 | RBCL, Solyc07g021200 | Ribulose bisphosphate carboxylase large chain (Fragment)... | 0.1 | OrthoFinder output from all 47 species | |
| Solyc12g062540.3.1 | RBCL, Solyc12g062540 | Ribulose bisphosphate carboxylase large chain (Fragment)... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc12g062550.1.1 | RBCL, Solyc12g062550 | Ribulose bisphosphate carboxylase large chain OS=Solanum... | 0.01 | OrthoFinder output from all 47 species | |
| Solyc12g062560.1.1 | RPOC1, Solyc12g062560 | DNA-directed RNA polymerase subunit beta OS=Nicotiana... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g17352 | RBCL | large subunit of ribulose-1,5-bisphosphat... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e002755_P001 | RBCL, Zm00001e002755 | Ribulose bisphosphate carboxylase large chain OS=Zea... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031080_P001 | RBCL, Zm00001e031080 | Ribulose bisphosphate carboxylase large chain OS=Zea... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e042029_P001 | RBCL, Zm00001e042029 | large subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e042051_P001 | RBCL, Zm00001e042051 | large subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e042083_P001 | RBCL, Zm00001e042083 | large subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e042095_P001 | RBCL, Zm00001e042095 | large subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e042403_P001 | RBCL, Zm00001e042403 | large subunit of ribulose-1,5-bisphosphat... | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | IEP | HCCA |
| BP | GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| CC | GO:0009579 | thylakoid | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |