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  5. Sacu_v1.1_s0234.g026525

Sacu_v1.1_s0234.g026525


Description : accessory component *(ATG13) of ATG1-13 autophagosome assembly control complex & original description: CDS=451-2439


Gene families : OG0001611 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001611_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0234.g026525
Cluster HCCA: Cluster_40

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00189720 evm_27.TU.AmTr_v1... Vesicle trafficking.autophagosome formation.ATG1-13... 0.02 OrthoFinder output from all 47 species
Adi_g056008 No alias accessory component *(ATG13) of ATG1-13 autophagosome... 0.03 OrthoFinder output from all 47 species
Als_g15199 No alias accessory component *(ATG13) of ATG1-13 autophagosome... 0.02 OrthoFinder output from all 47 species
Azfi_s0013.g013271 No alias accessory component *(ATG13) of ATG1-13 autophagosome... 0.02 OrthoFinder output from all 47 species
Dcu_g11547 No alias accessory component *(ATG13) of ATG1-13 autophagosome... 0.02 OrthoFinder output from all 47 species
GSVIVT01026577001 No alias Vesicle trafficking.autophagosome formation.ATG1-13... 0.02 OrthoFinder output from all 47 species
Nbi_g43457 No alias accessory component *(ATG13) of ATG1-13 autophagosome... 0.02 OrthoFinder output from all 47 species
Zm00001e015258_P001 Zm00001e015258 accessory component ATG13 of ATG1-13 autophagosome... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006914 autophagy IEA Interproscan
CC GO:1990316 Atg1/ULK1 kinase complex IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004190 aspartic-type endopeptidase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005789 endoplasmic reticulum membrane IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006497 protein lipidation IEP HCCA
BP GO:0006505 GPI anchor metabolic process IEP HCCA
BP GO:0006506 GPI anchor biosynthetic process IEP HCCA
BP GO:0006643 membrane lipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006661 phosphatidylinositol biosynthetic process IEP HCCA
BP GO:0006664 glycolipid metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
BP GO:0008654 phospholipid biosynthetic process IEP HCCA
BP GO:0009247 glycolipid biosynthetic process IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009411 response to UV IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046467 membrane lipid biosynthetic process IEP HCCA
BP GO:0046474 glycerophospholipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
MF GO:0070001 aspartic-type peptidase activity IEP HCCA
BP GO:1903509 liposaccharide metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR018731 Atg13_N 14 296
No external refs found!