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  5. Sacu_v1.1_s0233.g026486

Sacu_v1.1_s0233.g026486


Description : not classified & original description: CDS=154-2919


Gene families : OG0000712 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000712_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0233.g026486
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00072820 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00061p00187940 evm_27.TU.AmTr_v1... GBF-interacting protein 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT3G07660 No alias Kinase-related protein of unknown function (DUF1296) 0.02 OrthoFinder output from all 47 species
Adi_g053981 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g061004 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Adi_g087204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g129391 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g11975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g11714 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g04483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene40926.t1 Aspi01Gene40926 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G033400.1 Ceric.02G033400 not classified & original description: pacid=50584302... 0.04 OrthoFinder output from all 47 species
Ceric.27G004200.1 Ceric.27G004200 not classified & original description: pacid=50604818... 0.03 OrthoFinder output from all 47 species
Ceric.29G083800.1 Ceric.29G083800 not classified & original description: pacid=50624429... 0.05 OrthoFinder output from all 47 species
Ehy_g07889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15721 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19406 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19941 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g22243 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021389001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_30926 No alias GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
LOC_Os09g08670.1 LOC_Os09g08670 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g15622 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_137710g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_60376g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_768428g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp4g06750.1 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g11005 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g13051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g28851 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g18048 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g07611 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14569 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g045230.4.1 Solyc07g045230 GBF-interacting protein 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g02140 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e020237_P001 Zm00001e020237 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e026550_P001 Zm00001e026550 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e028004_P001 Zm00001e028004 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000184 nuclear-transcribed mRNA catabolic process, nonsense-mediated decay IEP HCCA
BP GO:0000956 nuclear-transcribed mRNA catabolic process IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006401 RNA catabolic process IEP HCCA
BP GO:0006402 mRNA catabolic process IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009892 negative regulation of metabolic process IEP HCCA
BP GO:0010605 negative regulation of macromolecule metabolic process IEP HCCA
BP GO:0010629 negative regulation of gene expression IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016278 lysine N-methyltransferase activity IEP HCCA
MF GO:0016279 protein-lysine N-methyltransferase activity IEP HCCA
BP GO:0016570 histone modification IEP HCCA
BP GO:0016571 histone methylation IEP HCCA
BP GO:0018022 peptidyl-lysine methylation IEP HCCA
MF GO:0018024 histone lysine N-methyltransferase activity IEP HCCA
BP GO:0018205 peptidyl-lysine modification IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
BP GO:0034968 histone lysine methylation IEP HCCA
MF GO:0042054 histone methyltransferase activity IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
BP GO:0048519 negative regulation of biological process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR009719 GIP1_N 11 68
No external refs found!