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  5. Sacu_v1.1_s0194.g025415

Sacu_v1.1_s0194.g025415


Description : EC_3.2 glycosylase & original description: CDS=1-1449


Gene families : OG0000312 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000312_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0194.g025415
Cluster HCCA: Cluster_17

Target Alias Description ECC score Gene Family Method Actions
Dcu_g29621 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g08388 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09827 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15261 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17286 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g26386 No alias EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01026985001 No alias Probable polygalacturonase OS=Vitis vinifera 0.03 OrthoFinder output from all 47 species
Lfl_g40756 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021678 No alias EC_3.2 glycosylase & original description: CDS=1-1605 0.03 OrthoFinder output from all 47 species
Spa_g00967 No alias EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g06310 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51753 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10093 No alias EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g24209 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e021051_P001 Zm00001e021051 Probable polygalacturonase OS=Vitis vinifera... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 179 457
No external refs found!