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  5. Sacu_v1.1_s0191.g025305

Sacu_v1.1_s0191.g025305


Description : small solute transporter *(BT1) & original description: CDS=211-1782


Gene families : OG0002467 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002467_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0191.g025305

Target Alias Description ECC score Gene Family Method Actions
AT5G25040 No alias Major facilitator superfamily protein 0.03 OrthoFinder output from all 47 species
Aspi01Gene49580.t1 Aspi01Gene49580 small solute transporter *(BT1) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02631 No alias small solute transporter *(BT1) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26694 No alias small solute transporter *(BT1) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g006680.3.1 Solyc08g006680 small solute transporter (BT1) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
InterPro domains Description Start Stop
IPR039309 BT1 88 251
IPR039309 BT1 288 481
No external refs found!