Description : not classified & original description: CDS=1-1989
Gene families : OG0001722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001722_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sacu_v1.1_s0187.g025114 | |
Cluster | HCCA: Cluster_57 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00010p00262430 | ATFTSH6, FTSH6,... | ATP-dependent zinc metalloprotease FTSH 6, chloroplastic... | 0.01 | OrthoFinder output from all 47 species | |
AT3G02450 | No alias | cell division protein ftsH, putative | 0.03 | OrthoFinder output from all 47 species | |
Adi_g114970 | VAR2, FTSH2 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Ala_g14174 | FTSH8 | component *(FtsH1/2/5/6/8) of FtsH plastidial protease... | 0.03 | OrthoFinder output from all 47 species | |
Cba_g13333 | FTSH8 | component *(FtsH1/2/5/6/8) of FtsH plastidial protease... | 0.02 | OrthoFinder output from all 47 species | |
Cre09.g393950 | No alias | Probable inactive ATP-dependent zinc metalloprotease... | 0.02 | OrthoFinder output from all 47 species | |
Cre17.g720050 | FTSH8 | Protein degradation.peptidase families.metallopeptidase... | 0.02 | OrthoFinder output from all 47 species | |
LOC_Os06g45820.1 | VAR2, FTSH2,... | component FtsH1|2|5|6|8 of FtsH plastidial protease complexes | 0.02 | OrthoFinder output from all 47 species | |
Lfl_g04989 | FTSH8 | component *(FtsH1/2/5/6/8) of FtsH plastidial protease... | 0.03 | OrthoFinder output from all 47 species | |
MA_14707g0010 | VAR2, FTSH2 | component FtsH1|2|5|6|8 of FtsH plastidial protease complexes | 0.01 | OrthoFinder output from all 47 species | |
Msp_g02086 | VAR2, FTSH2 | component *(FtsH1/2/5/6/8) of FtsH plastidial protease... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g07153 | No alias | not classified & original description: none | 0.01 | OrthoFinder output from all 47 species | |
Nbi_g11426 | FTSH8 | component *(FtsH1/2/5/6/8) of FtsH plastidial protease... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g26838 | VAR2, FTSH2 | component *(FtsH1/2/5/6/8) of FtsH plastidial protease... | 0.03 | OrthoFinder output from all 47 species | |
Ore_g45571 | No alias | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
Ppi_g17712 | FTSH8 | component *(FtsH1/2/5/6/8) of FtsH plastidial protease... | 0.04 | OrthoFinder output from all 47 species | |
Sam_g18762 | No alias | component *(FtsH1/2/5/6/8) of FtsH plastidial protease... | 0.03 | OrthoFinder output from all 47 species | |
Sam_g37450 | No alias | component *(FtsH1/2/5/6/8) of FtsH plastidial protease... | 0.03 | OrthoFinder output from all 47 species | |
Solyc03g046340.3.1 | Solyc03g046340 | component FtsHi of protein translocation ATPase motor complex | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | Interproscan |
MF | GO:0016887 | ATP hydrolysis activity | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0005543 | phospholipid binding | IEP | HCCA |
BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
BP | GO:0006325 | chromatin organization | IEP | HCCA |
BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
BP | GO:0006720 | isoprenoid metabolic process | IEP | HCCA |
BP | GO:0006721 | terpenoid metabolic process | IEP | HCCA |
BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0008299 | isoprenoid biosynthetic process | IEP | HCCA |
MF | GO:0008661 | 1-deoxy-D-xylulose-5-phosphate synthase activity | IEP | HCCA |
MF | GO:0015035 | protein-disulfide reductase activity | IEP | HCCA |
MF | GO:0015036 | disulfide oxidoreductase activity | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
BP | GO:0016114 | terpenoid biosynthetic process | IEP | HCCA |
BP | GO:0016226 | iron-sulfur cluster assembly | IEP | HCCA |
BP | GO:0016485 | protein processing | IEP | HCCA |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | HCCA |
MF | GO:0016744 | transketolase or transaldolase activity | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | HCCA |
MF | GO:0030247 | polysaccharide binding | IEP | HCCA |
BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | HCCA |
BP | GO:0051604 | protein maturation | IEP | HCCA |
BP | GO:0071586 | CAAX-box protein processing | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
MF | GO:2001070 | starch binding | IEP | HCCA |
No external refs found! |