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  5. Sacu_v1.1_s0177.g024632

Sacu_v1.1_s0177.g024632


Description : not classified & original description: CDS=1534-2694


Gene families : OG0003410 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003410_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0177.g024632
Cluster HCCA: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
AT5G44250 No alias Protein of unknown function DUF829, transmembrane 53 0.02 OrthoFinder output from all 47 species
Adi_g000622 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene47032.t1 Aspi01Gene47032 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_23053 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os11g40070.1 LOC_Os11g40070 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g03742 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp2g07410.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0005542 folic acid binding IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006633 fatty acid biosynthetic process IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016790 thiolester hydrolase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0031406 carboxylic acid binding IEP HCCA
MF GO:0033218 amide binding IEP HCCA
MF GO:0043177 organic acid binding IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0072341 modified amino acid binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR046625 DUF6737 158 200
IPR008547 DUF829_TMEM53 40 303
No external refs found!