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Aliases : RPL18
Description : component *(eL18) of large ribosomal-subunit (LSU) proteome & original description: CDS=107-784
Gene families : OG0001263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001263_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sacu_v1.1_s0175.g024575 | |
| Cluster | HCCA: Cluster_34 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT3G05590 | RPL18 | ribosomal protein L18 | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g35052 | RPL18 | component *(eL18) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g11456 | RPL18 | component *(eL18) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00000142.18 | RPL18 | 60S ribosomal protein L18 (Fragment) OS=Cicer arietinum | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01031168001 | RPL18 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01035120001 | RPL18 | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g22180.1 | LOC_Os03g22180 | component RPL18 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g06310.1 | LOC_Os05g06310 | component RPL18 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os07g47780.1 | LOC_Os07g47780 | component RPL18 of LSU proteome component | 0.05 | OrthoFinder output from all 47 species | |
| Mp1g22500.1 | No alias | component RPL18 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c1_5330V3.1 | RPL18, Pp3c1_5330 | ribosomal protein L18 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c2_32510V3.1 | RPL18, Pp3c2_32510 | ribosomal protein L18 | 0.01 | OrthoFinder output from all 47 species | |
| Pp3c2_34080V3.1 | RPL18, Pp3c2_34080 | ribosomal protein L18 | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c7_22030V3.1 | RPL18, Pp3c7_22030 | ribosomal protein L18 | 0.01 | OrthoFinder output from all 47 species | |
| Solyc01g099900.4.1 | RPL18, Solyc01g099900 | component RPL18 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g075290.3.1 | RPL18, Solyc09g075290 | component RPL18 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g21425 | RPL18 | component *(eL18) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g43867 | No alias | component *(eL18) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031155_P001 | Zm00001e031155 | component RPL18 of LSU proteome component | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e035836_P001 | Zm00001e035836 | component RPL18 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000287 | magnesium ion binding | IEP | HCCA |
| MF | GO:0004427 | inorganic diphosphate phosphatase activity | IEP | HCCA |
| MF | GO:0004650 | polygalacturonase activity | IEP | HCCA |
| MF | GO:0004812 | aminoacyl-tRNA ligase activity | IEP | HCCA |
| MF | GO:0004827 | proline-tRNA ligase activity | IEP | HCCA |
| CC | GO:0005737 | cytoplasm | IEP | HCCA |
| BP | GO:0006418 | tRNA aminoacylation for protein translation | IEP | HCCA |
| BP | GO:0006433 | prolyl-tRNA aminoacylation | IEP | HCCA |
| MF | GO:0008252 | nucleotidase activity | IEP | HCCA |
| MF | GO:0008253 | 5'-nucleotidase activity | IEP | HCCA |
| BP | GO:0009166 | nucleotide catabolic process | IEP | HCCA |
| BP | GO:0009262 | deoxyribonucleotide metabolic process | IEP | HCCA |
| BP | GO:0009264 | deoxyribonucleotide catabolic process | IEP | HCCA |
| MF | GO:0016462 | pyrophosphatase activity | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016791 | phosphatase activity | IEP | HCCA |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | HCCA |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | HCCA |
| MF | GO:0016846 | carbon-sulfur lyase activity | IEP | HCCA |
| MF | GO:0016875 | ligase activity, forming carbon-oxygen bonds | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0043038 | amino acid activation | IEP | HCCA |
| BP | GO:0043039 | tRNA aminoacylation | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0044281 | small molecule metabolic process | IEP | HCCA |
| BP | GO:0046434 | organophosphate catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| MF | GO:0047429 | nucleoside triphosphate diphosphatase activity | IEP | HCCA |
| MF | GO:0070567 | cytidylyltransferase activity | IEP | HCCA |
| BP | GO:1901136 | carbohydrate derivative catabolic process | IEP | HCCA |
| BP | GO:1901292 | nucleoside phosphate catabolic process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR021131 | Ribosomal_L18e/L15P | 40 | 225 |
| No external refs found! |