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  5. Sacu_v1.1_s0163.g024030

Sacu_v1.1_s0163.g024030


Description : not classified & original description: CDS=1-405


Gene families : OG0000398 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000398_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0163.g024030

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0137.g050989 No alias not classified & original description: CDS=1-801 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017742 No alias not classified & original description: CDS=1-609 0.03 OrthoFinder output from all 47 species
Sam_g03225 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g35062 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g38448 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!