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  5. Sacu_v1.1_s0157.g023709

Sacu_v1.1_s0157.g023709


Description : indole-3-glycerol phosphate synthase & original description: CDS=62-1189


Gene families : OG0004545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004545_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0157.g023709

Target Alias Description ECC score Gene Family Method Actions
Ceric.07G036100.1 Ceric.07G036100 indole-3-glycerol phosphate synthase & original... 0.04 OrthoFinder output from all 47 species
Cre13.g602350 No alias Amino acid metabolism.biosynthesis.shikimate... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004425 indole-3-glycerol-phosphate synthase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006808 regulation of nitrogen utilization IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
BP GO:0032101 regulation of response to external stimulus IEP HCCA
BP GO:0032104 regulation of response to extracellular stimulus IEP HCCA
BP GO:0032107 regulation of response to nutrient levels IEP HCCA
MF GO:0042802 identical protein binding IEP HCCA
MF GO:0042803 protein homodimerization activity IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0060590 ATPase regulator activity IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR013798 Indole-3-glycerol_P_synth_dom 139 369
No external refs found!