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  5. Sacu_v1.1_s0155.g023600

Sacu_v1.1_s0155.g023600


Description : substrate adapter component *(PUX1) of ER-associated protein degradation (ERAD) machinery & original description: CDS=1982-3706


Gene families : OG0003931 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003931_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0155.g023600

Target Alias Description ECC score Gene Family Method Actions
Ceric.39G013100.1 Ceric.39G013100 phosphomannomutase & original description:... 0.03 OrthoFinder output from all 47 species
Mp4g11210.1 No alias phosphomannomutase 0.02 OrthoFinder output from all 47 species
Msp_g05267 No alias phosphomannomutase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
MF GO:0016868 intramolecular transferase activity, phosphotransferases IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004827 proline-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006433 prolyl-tRNA aminoacylation IEP HCCA
MF GO:0015035 protein-disulfide reductase activity IEP HCCA
MF GO:0015036 disulfide oxidoreductase activity IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
BP GO:0071586 CAAX-box protein processing IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR005845 A-D-PHexomutase_a/b/a-II 262 367
IPR005844 A-D-PHexomutase_a/b/a-I 88 235
IPR005846 A-D-PHexomutase_a/b/a-III 375 476
No external refs found!