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  5. Sacu_v1.1_s0153.g023525

Sacu_v1.1_s0153.g023525


Description : component *(VPS18) of HOPS/CORVET membrane tethering complexes & original description: CDS=511-3600


Gene families : OG0004357 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004357_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0153.g023525
Cluster HCCA: Cluster_63

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00001486.1 No alias Vesicle trafficking.target membrane... 0.01 OrthoFinder output from all 47 species
Cre07.g328550 No alias Vesicle trafficking.target membrane... 0.02 OrthoFinder output from all 47 species
Lfl_g02278 No alias component *(VPS18) of HOPS/CORVET membrane tethering... 0.03 OrthoFinder output from all 47 species
Pir_g38811 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006886 intracellular protein transport IEA Interproscan
BP GO:0016192 vesicle-mediated transport IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003678 DNA helicase activity IEP HCCA
MF GO:0003684 damaged DNA binding IEP HCCA
MF GO:0003880 protein C-terminal carboxyl O-methyltransferase activity IEP HCCA
MF GO:0003997 acyl-CoA oxidase activity IEP HCCA
MF GO:0004671 protein C-terminal S-isoprenylcysteine carboxyl O-methyltransferase activity IEP HCCA
CC GO:0005777 peroxisome IEP HCCA
BP GO:0006072 glycerol-3-phosphate metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006479 protein methylation IEP HCCA
BP GO:0006481 C-terminal protein methylation IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006635 fatty acid beta-oxidation IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007030 Golgi organization IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0008213 protein alkylation IEP HCCA
MF GO:0008276 protein methyltransferase activity IEP HCCA
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP HCCA
BP GO:0009056 catabolic process IEP HCCA
BP GO:0009062 fatty acid catabolic process IEP HCCA
MF GO:0009378 four-way junction helicase activity IEP HCCA
MF GO:0010340 carboxyl-O-methyltransferase activity IEP HCCA
BP GO:0016042 lipid catabolic process IEP HCCA
BP GO:0016054 organic acid catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
BP GO:0018410 C-terminal protein amino acid modification IEP HCCA
BP GO:0019395 fatty acid oxidation IEP HCCA
BP GO:0030258 lipid modification IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0034440 lipid oxidation IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0043687 post-translational protein modification IEP HCCA
BP GO:0044242 cellular lipid catabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046168 glycerol-3-phosphate catabolic process IEP HCCA
BP GO:0046395 carboxylic acid catabolic process IEP HCCA
BP GO:0046434 organophosphate catabolic process IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0051998 protein carboxyl O-methyltransferase activity IEP HCCA
BP GO:0052646 alditol phosphate metabolic process IEP HCCA
BP GO:0072329 monocarboxylic acid catabolic process IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901575 organic substance catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 18 65
IPR007810 Pep3_Vps18 280 429
IPR000547 Clathrin_H-chain/VPS_repeat 645 797
No external refs found!