Sacu_v1.1_s0145.g023015


Description : not classified & original description: CDS=1-360


Gene families : OG0000025 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0145.g023015

Target Alias Description ECC score Gene Family Method Actions
Aev_g44048 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07827 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05206 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g21329 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g27100 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g38957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12724.t1 Aspi01Gene12724 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene36971.t1 Aspi01Gene36971 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50474.t1 Aspi01Gene50474 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69305.t2 Aspi01Gene69305 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0084.g038986 No alias not classified & original description: CDS=1-393 0.05 OrthoFinder output from all 47 species
Cba_g25363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G097800.1 Ceric.07G097800 not classified & original description: pacid=50626105... 0.05 OrthoFinder output from all 47 species
Len_g03039 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26279 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g02250 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g37585 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g10548 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14038 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g49298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0017.g007076 No alias not classified & original description: CDS=1-504 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009739 No alias not classified & original description: CDS=1-258 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0194.g025438 No alias not classified & original description: CDS=1-483 0.03 OrthoFinder output from all 47 species
Sam_g00665 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g36950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0001216 DNA-binding transcription activator activity IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
MF GO:0061608 nuclear import signal receptor activity IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:0140142 nucleocytoplasmic carrier activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!