Sacu_v1.1_s0139.g022632 (emb2726)

Aliases : emb2726

Description : translation elongation factor *(EF-Ts) & original description: CDS=1-837

Gene families : OG0003250 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003250_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0139.g022632

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00109p00129480	emb2726,...	Protein biosynthesis.organelle translation...	0.04	OrthoFinder output from all 47 species
AT4G29060	emb2726	elongation factor Ts family protein	0.03	OrthoFinder output from all 47 species
Adi_g053355	emb2726	translation elongation factor *(EF-Ts) & original...	0.04	OrthoFinder output from all 47 species
Adi_g118105	emb2726	translation elongation factor *(EF-Ts) & original...	0.06	OrthoFinder output from all 47 species
Aev_g28882	emb2726	translation elongation factor *(EF-Ts) & original...	0.04	OrthoFinder output from all 47 species
Ala_g13148	emb2726	translation elongation factor *(EF-Ts) & original...	0.08	OrthoFinder output from all 47 species
Ala_g21504	emb2726	translation elongation factor *(EF-Ts) & original...	0.04	OrthoFinder output from all 47 species
Ala_g30187	emb2726	translation elongation factor *(EF-Ts) & original...	0.05	OrthoFinder output from all 47 species
Aob_g08834	emb2726	translation elongation factor *(EF-Ts) & original...	0.05	OrthoFinder output from all 47 species
Aop_g04344	emb2726	translation elongation factor *(EF-Ts) & original...	0.05	OrthoFinder output from all 47 species
Aspi01Gene11644.t1	emb2726, Aspi01Gene11644	translation elongation factor *(EF-Ts) & original...	0.04	OrthoFinder output from all 47 species
Cba_g71569	emb2726	translation elongation factor *(EF-Ts) & original...	0.05	OrthoFinder output from all 47 species
Ceric.03G081000.1	emb2726, Ceric.03G081000	translation elongation factor *(EF-Ts) & original...	0.1	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00021319.56	emb2726	Protein biosynthesis.organelle translation...	0.02	OrthoFinder output from all 47 species
Cre12.g519180	emb2726	Protein biosynthesis.organelle translation...	0.04	OrthoFinder output from all 47 species
Dac_g05556	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Dac_g16809	emb2726	translation elongation factor *(EF-Ts) & original...	0.05	OrthoFinder output from all 47 species
Dac_g16810	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Dac_g19131	emb2726	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Dcu_g01025	emb2726	translation elongation factor *(EF-Ts) & original...	0.06	OrthoFinder output from all 47 species
Dde_g06930	emb2726	translation elongation factor *(EF-Ts) & original...	0.06	OrthoFinder output from all 47 species
Ehy_g05564	emb2726	translation elongation factor *(EF-Ts) & original...	0.04	OrthoFinder output from all 47 species
Gb_29672	emb2726	EF-Ts translation elongation factor	0.04	OrthoFinder output from all 47 species
Len_g59815	emb2726	translation elongation factor *(EF-Ts) & original...	0.07	OrthoFinder output from all 47 species
Lfl_g09522	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Mp2g23510.1	emb2726	EF-Ts translation elongation factor	0.04	OrthoFinder output from all 47 species
Msp_g12193	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Ore_g08953	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Pir_g07418	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Pir_g42601	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Pir_g59879	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Pnu_g11907	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g11585	emb2726	translation elongation factor *(EF-Ts) & original...	0.03	OrthoFinder output from all 47 species
Ppi_g29843	emb2726	translation elongation factor *(EF-Ts) & original...	0.04	OrthoFinder output from all 47 species
Spa_g11112	emb2726	translation elongation factor *(EF-Ts) & original...	0.07	OrthoFinder output from all 47 species
Spa_g21728	emb2726	translation elongation factor *(EF-Ts) & original...	0.08	OrthoFinder output from all 47 species
Tin_g03798	emb2726	translation elongation factor *(EF-Ts) & original...	0.09	OrthoFinder output from all 47 species
Zm00001e010912_P001	emb2726, Zm00001e010912	EF-Ts translation elongation factor	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003746	translation elongation factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006414	translational elongation	IEA	Interproscan
MF	GO:0008135	translation factor activity, RNA binding	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
MF	GO:0045182	translation regulator activity	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0090079	translation regulator activity, nucleic acid binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003735	structural constituent of ribosome	IEP	HCCA
MF	GO:0004618	phosphoglycerate kinase activity	IEP	HCCA
MF	GO:0005198	structural molecule activity	IEP	HCCA
MF	GO:0005261	monoatomic cation channel activity	IEP	HCCA
CC	GO:0005575	cellular_component	IEP	HCCA
CC	GO:0005839	proteasome core complex	IEP	HCCA
CC	GO:0005840	ribosome	IEP	HCCA
BP	GO:0005984	disaccharide metabolic process	IEP	HCCA
BP	GO:0005991	trehalose metabolic process	IEP	HCCA
BP	GO:0005992	trehalose biosynthetic process	IEP	HCCA
BP	GO:0006090	pyruvate metabolic process	IEP	HCCA
BP	GO:0006091	generation of precursor metabolites and energy	IEP	HCCA
BP	GO:0006096	glycolytic process	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006165	nucleoside diphosphate phosphorylation	IEP	HCCA
BP	GO:0006412	translation	IEP	HCCA
BP	GO:0006488	dolichol-linked oligosaccharide biosynthetic process	IEP	HCCA
BP	GO:0006490	oligosaccharide-lipid intermediate biosynthetic process	IEP	HCCA
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	HCCA
BP	GO:0006518	peptide metabolic process	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
BP	GO:0006757	ATP generation from ADP	IEP	HCCA
BP	GO:0006807	nitrogen compound metabolic process	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009132	nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009135	purine nucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009179	purine ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009185	ribonucleoside diphosphate metabolic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009311	oligosaccharide metabolic process	IEP	HCCA
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	HCCA
CC	GO:0009521	photosystem	IEP	HCCA
CC	GO:0009523	photosystem II	IEP	HCCA
CC	GO:0009654	photosystem II oxygen evolving complex	IEP	HCCA
BP	GO:0009767	photosynthetic electron transport chain	IEP	HCCA
MF	GO:0015078	proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015252	proton channel activity	IEP	HCCA
BP	GO:0015979	photosynthesis	IEP	HCCA
BP	GO:0015986	proton motive force-driven ATP synthesis	IEP	HCCA
MF	GO:0016774	phosphotransferase activity, carboxyl group as acceptor	IEP	HCCA
BP	GO:0019538	protein metabolic process	IEP	HCCA
BP	GO:0019637	organophosphate metabolic process	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	HCCA
MF	GO:0019843	rRNA binding	IEP	HCCA
CC	GO:0019898	extrinsic component of membrane	IEP	HCCA
BP	GO:0019941	modification-dependent protein catabolic process	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
CC	GO:0032991	protein-containing complex	IEP	HCCA
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	HCCA
BP	GO:0034637	cellular carbohydrate biosynthetic process	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0043043	peptide biosynthetic process	IEP	HCCA
CC	GO:0043226	organelle	IEP	HCCA
CC	GO:0043228	non-membrane-bounded organelle	IEP	HCCA
CC	GO:0043229	intracellular organelle	IEP	HCCA
CC	GO:0043232	intracellular non-membrane-bounded organelle	IEP	HCCA
BP	GO:0043603	amide metabolic process	IEP	HCCA
BP	GO:0043604	amide biosynthetic process	IEP	HCCA
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	HCCA
BP	GO:0044238	primary metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	HCCA
BP	GO:0046031	ADP metabolic process	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046351	disaccharide biosynthetic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
MF	GO:0046933	proton-transporting ATP synthase activity, rotational mechanism	IEP	HCCA
BP	GO:0046939	nucleotide phosphorylation	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
CC	GO:0098796	membrane protein complex	IEP	HCCA
CC	GO:0110165	cellular anatomical entity	IEP	HCCA
BP	GO:1901135	carbohydrate derivative metabolic process	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901564	organonitrogen compound metabolic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901575	organic substance catabolic process	IEP	HCCA
CC	GO:1902494	catalytic complex	IEP	HCCA
CC	GO:1990204	oxidoreductase complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR014039	Transl_elong_EFTs/EF1B_dimer	114	258

External Links

No external refs found!

Sacu_v1.1_s0139.g022632 (emb2726)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation