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  5. Sacu_v1.1_s0135.g022373

Sacu_v1.1_s0135.g022373


Description : not classified & original description: CDS=333-1151


Gene families : OG0000548 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0135.g022373
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
AT5G10580 No alias Protein of unknown function, DUF599 0.04 OrthoFinder output from all 47 species
AT5G24790 No alias Protein of unknown function, DUF599 0.03 OrthoFinder output from all 47 species
Ala_g20307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12993 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30832 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25945.t1 Aspi01Gene25945 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene37432.t1 Aspi01Gene37432 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene51507.t2 Aspi01Gene51507 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56804.t1 Aspi01Gene56804 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s1197.g099364 No alias not classified & original description: CDS=1-918 0.06 OrthoFinder output from all 47 species
Dac_g17408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g34756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g29757 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Gb_09350 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_09351 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Gb_19192 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g40940.1 LOC_Os08g40940 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_26720g0010 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Msp_g20992 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g17222 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g47908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g46513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0146.g023071 No alias not classified & original description: CDS=695-1528 0.04 OrthoFinder output from all 47 species
Smo101278 No alias No description available 0.03 OrthoFinder output from all 47 species
Spa_g48898 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g10500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004556 alpha-amylase activity IEP HCCA
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016160 amylase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006747 DUF599 12 230
No external refs found!