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  5. Sacu_v1.1_s0116.g021073

Sacu_v1.1_s0116.g021073 (YCF32, PSBY)


Aliases : YCF32, PSBY

Description : component *(PsbY) of PS-II complex & original description: CDS=1-792


Gene families : OG0003004 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003004_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0116.g021073

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00157390 YCF32, PSBY,... Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.06 OrthoFinder output from all 47 species
AT1G67740 YCF32, PSBY photosystem II BY 0.03 OrthoFinder output from all 47 species
Aev_g04515 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g20925 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04122 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g15204 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Als_g00686 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g09607 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15370 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g17372 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g27429 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene07588.t1 YCF32, PSBY,... component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63678.t1 YCF32, PSBY,... component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0120.g046761 YCF32, PSBY component *(PsbY) of PS-II complex & original... 0.04 OrthoFinder output from all 47 species
Ceric.27G033400.1 YCF32, PSBY,... component *(PsbY) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.33G057000.1 YCF32, PSBY,... component *(PsbY) of PS-II complex & original... 0.03 OrthoFinder output from all 47 species
Cre10.g452100 No alias Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.05 OrthoFinder output from all 47 species
Dac_g05677 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11818 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g03541 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g51618 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g25972 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g00811 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.06 OrthoFinder output from all 47 species
Gb_22296 YCF32, PSBY component PsbY of PS-II complex 0.05 OrthoFinder output from all 47 species
LOC_Os08g02630.1 YCF32, PSBY,... component PsbY of PS-II complex 0.1 OrthoFinder output from all 47 species
Len_g16274 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
MA_12201g0010 YCF32, PSBY component PsbY of PS-II complex 0.04 OrthoFinder output from all 47 species
Mp8g12730.1 YCF32, PSBY component PsbY of PS-II complex 0.07 OrthoFinder output from all 47 species
Msp_g12997 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00365 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g24253 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g38878 YCF32, PSBY component *(PsbY) of PS-II complex & original description: none 0.05 OrthoFinder output from all 47 species
Smo441673 YCF32, PSBY Photosynthesis.photophosphorylation.photosystem II.PS-II... 0.03 OrthoFinder output from all 47 species
Zm00001e029235_P001 YCF32, PSBY,... component PsbY of PS-II complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0009523 photosystem II IEA Interproscan
BP GO:0015979 photosynthesis IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0030145 manganese ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004451 isocitrate lyase activity IEP HCCA
MF GO:0004743 pyruvate kinase activity IEP HCCA
MF GO:0005216 monoatomic ion channel activity IEP HCCA
MF GO:0005261 monoatomic cation channel activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006576 biogenic amine metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
BP GO:0009309 amine biosynthetic process IEP HCCA
CC GO:0009512 cytochrome b6f complex IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015252 proton channel activity IEP HCCA
MF GO:0015267 channel activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016833 oxo-acid-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
MF GO:0022803 passive transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
MF GO:0030410 nicotianamine synthase activity IEP HCCA
BP GO:0030417 nicotianamine metabolic process IEP HCCA
BP GO:0030418 nicotianamine biosynthetic process IEP HCCA
MF GO:0030955 potassium ion binding IEP HCCA
MF GO:0031420 alkali metal ion binding IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0042401 biogenic amine biosynthetic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0046933 proton-transporting ATP synthase activity, rotational mechanism IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
CC GO:0070069 cytochrome complex IEP HCCA
BP GO:0072350 tricarboxylic acid metabolic process IEP HCCA
BP GO:0072351 tricarboxylic acid biosynthetic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR009388 PSII_PsbY 89 121
IPR009388 PSII_PsbY 153 185
IPR009388 PSII_PsbY 227 259
No external refs found!