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  5. Sacu_v1.1_s0116.g021055

Sacu_v1.1_s0116.g021055 (LCV1)


Aliases : LCV1

Description : regulatory protein *(COV1) of vacuolar protein sorting & original description: CDS=86-709


Gene families : OG0001606 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001606_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0116.g021055
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
Als_g37390 COV1 regulatory protein *(COV1) of vacuolar protein sorting &... 0.03 OrthoFinder output from all 47 species
Ehy_g08984 COV1 regulatory protein *(COV1) of vacuolar protein sorting &... 0.03 OrthoFinder output from all 47 species
Len_g34122 COV1 regulatory protein *(COV1) of vacuolar protein sorting &... 0.03 OrthoFinder output from all 47 species
Lfl_g08454 COV1 regulatory protein *(COV1) of vacuolar protein sorting &... 0.03 OrthoFinder output from all 47 species
Ore_g03926 COV1 regulatory protein *(COV1) of vacuolar protein sorting &... 0.03 OrthoFinder output from all 47 species
Solyc04g071760.3.1 LCV3, Solyc04g071760 Protein LIKE COV 3 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g08478 COV1 regulatory protein *(COV1) of vacuolar protein sorting &... 0.05 OrthoFinder output from all 47 species
Zm00001e024792_P002 LCV1, Zm00001e024792 Protein CONTINUOUS VASCULAR RING 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e028665_P001 LCV2, Zm00001e028665 Protein LIKE COV 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003712 transcription coregulator activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004345 glucose-6-phosphate dehydrogenase activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006006 glucose metabolic process IEP HCCA
BP GO:0006099 tricarboxylic acid cycle IEP HCCA
BP GO:0006308 DNA catabolic process IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
BP GO:0019439 aromatic compound catabolic process IEP HCCA
BP GO:0034655 nucleobase-containing compound catabolic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0044270 cellular nitrogen compound catabolic process IEP HCCA
CC GO:0045273 respiratory chain complex II IEP HCCA
BP GO:0046700 heterocycle catabolic process IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
CC GO:0098803 respiratory chain complex IEP HCCA
BP GO:1901361 organic cyclic compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR007462 COV1-like 108 188
No external refs found!