Sacu_v1.1_s0114.g020923


Description : not classified & original description: CDS=290-1411


Gene families : OG0003076 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003076_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0114.g020923

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00119660 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT1G22850 No alias SNARE associated Golgi protein family 0.04 OrthoFinder output from all 47 species
Aev_g05366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04441 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g37105 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07759 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015301 No alias not classified & original description: CDS=177-1319 0.03 OrthoFinder output from all 47 species
Cba_g16087 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.17G048300.1 Ceric.17G048300 not classified & original description: pacid=50617987... 0.02 OrthoFinder output from all 47 species
Ceric.31G048100.1 Ceric.31G048100 not classified & original description: pacid=50574061... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020538.64 No alias No description available 0.02 OrthoFinder output from all 47 species
Dac_g13677 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g38294 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_39382 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os01g66170.1 LOC_Os01g66170 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g12607 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01439 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g05345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g00945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g15714 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g04260 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g41597 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g11711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g11712 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e019037_P002 Zm00001e019037 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e028596_P001 Zm00001e028596 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004176 ATP-dependent peptidase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008942 nitrite reductase [NAD(P)H] activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010206 photosystem II repair IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
MF GO:0016661 oxidoreductase activity, acting on other nitrogenous compounds as donors IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
BP GO:0017038 protein import IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0030091 protein repair IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043021 ribonucleoprotein complex binding IEP HCCA
MF GO:0043022 ribosome binding IEP HCCA
MF GO:0044877 protein-containing complex binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046857 oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
BP GO:0071702 organic substance transport IEP HCCA
BP GO:0071705 nitrogen compound transport IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
MF GO:0098809 nitrite reductase activity IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR032816 SNARE_assoc 205 323
No external refs found!