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  5. Sacu_v1.1_s0094.g019154

Sacu_v1.1_s0094.g019154


Description : not classified & original description: CDS=1-3057


Gene families : OG0002452 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002452_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0094.g019154
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00061p00181260 evm_27.TU.AmTr_v1... C2 and GRAM domain-containing protein At1g03370... 0.04 OrthoFinder output from all 47 species
Aev_g01534 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G027000.1 Ceric.16G027000 not classified & original description: pacid=50589375... 0.05 OrthoFinder output from all 47 species
Dcu_g23957 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Gb_29807 No alias C2 and GRAM domain-containing protein At1g03370... 0.02 OrthoFinder output from all 47 species
LOC_Os06g19400.1 LOC_Os06g19400 C2 and GRAM domain-containing protein At1g03370... 0.03 OrthoFinder output from all 47 species
LOC_Os06g40570.1 LOC_Os06g40570 C2 and GRAM domain-containing protein At1g03370... 0.04 OrthoFinder output from all 47 species
LOC_Os08g38440.1 LOC_Os08g38440 C2 and GRAM domain-containing protein At1g03370... 0.04 OrthoFinder output from all 47 species
Msp_g28109 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g13629 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g08286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo118690 No alias C2 and GRAM domain-containing protein At1g03370... 0.02 OrthoFinder output from all 47 species
Solyc04g015160.3.1 Solyc04g015160 C2 and GRAM domain-containing protein At1g03370... 0.03 OrthoFinder output from all 47 species
Zm00001e037435_P001 Zm00001e037435 C2 and GRAM domain-containing protein At1g03370... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009966 regulation of signal transduction IEP HCCA
BP GO:0010646 regulation of cell communication IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
BP GO:0023051 regulation of signaling IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0032012 regulation of ARF protein signal transduction IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0046578 regulation of Ras protein signal transduction IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051056 regulation of small GTPase mediated signal transduction IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1902531 regulation of intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR004182 GRAM 650 737
IPR000008 C2_dom 495 594
IPR000008 C2_dom 2 100
IPR031968 VASt 220 362
IPR031968 VASt 867 990
No external refs found!