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  5. Sacu_v1.1_s0081.g018058

Sacu_v1.1_s0081.g018058


Description : peptidyl-prolyl cis-trans isomerase *(FKBP16-4) & original description: CDS=1-540


Gene families : OG0007594 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007594_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0081.g018058
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00256470 evm_27.TU.AmTr_v1... Protein modification.protein folding and quality... 0.04 OrthoFinder output from all 47 species
AT3G10060 No alias FKBP-like peptidyl-prolyl cis-trans isomerase family protein 0.03 OrthoFinder output from all 47 species
Aob_g01162 No alias peptidyl-prolyl cis-trans isomerase *(FKBP16-4) &... 0.02 OrthoFinder output from all 47 species
Aop_g00289 No alias peptidyl-prolyl cis-trans isomerase *(FKBP16-4) &... 0.02 OrthoFinder output from all 47 species
Cba_g24422 No alias peptidyl-prolyl cis-trans isomerase *(FKBP16-4) &... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020927.49 No alias Protein modification.protein folding and quality... 0.01 OrthoFinder output from all 47 species
Mp6g12290.1 No alias protein folding catalyst (FKBP) 0.04 OrthoFinder output from all 47 species
Pir_g06991 No alias peptidyl-prolyl cis-trans isomerase *(FKBP16-4) &... 0.03 OrthoFinder output from all 47 species
Ppi_g06727 No alias peptidyl-prolyl cis-trans isomerase *(FKBP16-4) &... 0.03 OrthoFinder output from all 47 species
Spa_g10830 No alias peptidyl-prolyl cis-trans isomerase *(FKBP16-4) &... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004820 glycine-tRNA ligase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006426 glycyl-tRNA aminoacylation IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
InterPro domains Description Start Stop
IPR001179 PPIase_FKBP_dom 68 163
No external refs found!