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  5. Sacu_v1.1_s0077.g017588

Sacu_v1.1_s0077.g017588


Description : not classified & original description: CDS=1-600


Gene families : OG0000293 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000293_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0077.g017588

Target Alias Description ECC score Gene Family Method Actions
AT3G18450 No alias PLAC8 family protein 0.03 OrthoFinder output from all 47 species
AT3G18460 No alias PLAC8 family protein 0.02 OrthoFinder output from all 47 species
LOC_Os02g36940.1 LOC_Os02g36940 Cell number regulator 2 OS=Zea mays... 0.03 OrthoFinder output from all 47 species
LOC_Os03g61470.1 LOC_Os03g61470 Cell number regulator 10 OS=Zea mays... 0.02 OrthoFinder output from all 47 species
MA_8647295g0010 No alias Protein PLANT CADMIUM RESISTANCE 6 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc03g120600.4.1 Solyc03g120600 Protein PLANT CADMIUM RESISTANCE 8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc08g013910.4.1 PCR2, Solyc08g013910 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!