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  5. Sacu_v1.1_s0070.g016751

Sacu_v1.1_s0070.g016751 (SRG2, DIN2, BGLU30)


Aliases : SRG2, DIN2, BGLU30

Description : not classified & original description: CDS=432-767


Gene families : OG0000028 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0070.g016751
Cluster HCCA: Cluster_9

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00016p00257520 BGLU11,... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.02 OrthoFinder output from all 47 species
AT2G44460 BGLU28 beta glucosidase 28 0.02 OrthoFinder output from all 47 species
Sam_g49583 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Smo98083 BGLU42 Beta-glucosidase 4 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Zm00001e019486_P001 BGLU11, Zm00001e019486 Beta-glucosidase 5 OS=Oryza sativa subsp. japonica... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005759 mitochondrial matrix IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
CC GO:0031974 membrane-enclosed lumen IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
CC GO:0043233 organelle lumen IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
CC GO:0070013 intracellular organelle lumen IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR001360 Glyco_hydro_1 33 73
No external refs found!