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  5. Sacu_v1.1_s0069.g016614

Sacu_v1.1_s0069.g016614 (MED8)


Aliases : MED8

Description : component *(MED8) of head module of MEDIATOR transcription co-activator complex & original description: CDS=142-1803


Gene families : OG0006634 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006634_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0069.g016614
Cluster HCCA: Cluster_59

Target Alias Description ECC score Gene Family Method Actions
LOC_Os03g31010.1 MED8, LOC_Os03g31010 component MED8 of head module of MEDIATOR transcription... 0.04 OrthoFinder output from all 47 species
Msp_g45062 MED8 component *(MED8) of head module of MEDIATOR... 0.03 OrthoFinder output from all 47 species
Solyc03g123960.3.1 MED8, Solyc03g123960 component MED8 of head module of MEDIATOR transcription... 0.07 OrthoFinder output from all 47 species
Tin_g08794 MED8 component *(MED8) of head module of MEDIATOR... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP HCCA
MF GO:0003729 mRNA binding IEP HCCA
MF GO:0004673 protein histidine kinase activity IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0006606 protein import into nucleus IEP HCCA
BP GO:0006913 nucleocytoplasmic transport IEP HCCA
BP GO:0009314 response to radiation IEP HCCA
BP GO:0009416 response to light stimulus IEP HCCA
BP GO:0009581 detection of external stimulus IEP HCCA
BP GO:0009582 detection of abiotic stimulus IEP HCCA
BP GO:0009583 detection of light stimulus IEP HCCA
BP GO:0009584 detection of visible light IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009628 response to abiotic stimulus IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP HCCA
CC GO:0031011 Ino80 complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034504 protein localization to nucleus IEP HCCA
CC GO:0035145 exon-exon junction complex IEP HCCA
BP GO:0051169 nuclear transport IEP HCCA
BP GO:0051170 import into nucleus IEP HCCA
BP GO:0051606 detection of stimulus IEP HCCA
CC GO:0070603 SWI/SNF superfamily-type complex IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
CC GO:0097346 INO80-type complex IEP HCCA
MF GO:0140299 small molecule sensor activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1904949 ATPase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!