Sacu_v1.1_s0068.g016402


Description : not classified & original description: CDS=478-1323


Gene families : OG0000192 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000192_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0068.g016402

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00253880 evm_27.TU.AmTr_v1... Short-chain dehydrogenase reductase 3b OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00030p00244080 evm_27.TU.AmTr_v1... Tropinone reductase-like 1 OS=Erythroxylum coca 0.03 OrthoFinder output from all 47 species
AMTR_s00030p00244570 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
AMTR_s00044p00056720 ATA1, TA1, ASD,... Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ala_g22149 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g37539 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g25619 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g13481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene71695.t1 Aspi01Gene71695 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene71702.t1 Aspi01Gene71702 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G056900.1 Ceric.08G056900 not classified & original description: pacid=50638438... 0.04 OrthoFinder output from all 47 species
Ceric.09G025200.1 Ceric.09G025200 not classified & original description: pacid=50587016... 0.02 OrthoFinder output from all 47 species
Ceric.17G054700.1 Ceric.17G054700 not classified & original description: pacid=50617562... 0.03 OrthoFinder output from all 47 species
GSVIVT01008068001 No alias (-)-isopiperitenol/(-)-carveol dehydrogenase,... 0.03 OrthoFinder output from all 47 species
GSVIVT01030245001 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Gb_00715 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_05034 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Gb_05035 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species
Gb_07561 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_11757 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Gb_16803 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Gb_19313 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_25236 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Gb_36105 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os07g40250.1 LOC_Os07g40250 Tropinone reductase-like 1 OS=Erythroxylum coca... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46830.1 LOC_Os07g46830 Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46852.1 LOC_Os07g46852 Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
LOC_Os07g46930.1 LOC_Os07g46930 Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Len_g30853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g48178 SRE1, SIS4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g40850 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_112182g0010 No alias Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
MA_14140g0010 No alias Zerumbone synthase OS=Zingiber zerumbet... 0.04 OrthoFinder output from all 47 species
MA_57399g0020 No alias Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Mp1g09710.1 No alias Short-chain dehydrogenase reductase 3a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g19140.1 No alias Short-chain dehydrogenase reductase 4 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g24680.1 No alias Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Msp_g28863 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21644 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g15237 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g24876 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63069 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc11g018600.1.1 ATA1, TA1, ASD,... Short-chain dehydrogenase reductase ATA1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc12g056600.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Solyc12g056610.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Solyc12g056700.2.1 Solyc12g056700 Secoisolariciresinol dehydrogenase (Fragment)... 0.02 OrthoFinder output from all 47 species
Solyc12g056710.3.1 SRE1, SIS4,... Secoisolariciresinol dehydrogenase (Fragment)... 0.03 OrthoFinder output from all 47 species
Spa_g12161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g17528 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19089 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e008253_P002 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species
Zm00001e008424_P001 SRE1, SIS4,... Momilactone A synthase OS=Oryza sativa subsp. japonica... 0.05 OrthoFinder output from all 47 species
Zm00001e021516_P001 Zm00001e021516 Short-chain dehydrogenase reductase 2a OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e035437_P002 Zm00001e035437 Secoisolariciresinol dehydrogenase (Fragment)... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP HCCA
CC GO:0000930 gamma-tubulin complex IEP HCCA
CC GO:0000931 gamma-tubulin ring complex IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004568 chitinase activity IEP HCCA
MF GO:0005381 iron ion transmembrane transporter activity IEP HCCA
BP GO:0006022 aminoglycan metabolic process IEP HCCA
BP GO:0006026 aminoglycan catabolic process IEP HCCA
BP GO:0006030 chitin metabolic process IEP HCCA
BP GO:0006032 chitin catabolic process IEP HCCA
BP GO:0006040 amino sugar metabolic process IEP HCCA
BP GO:0006826 iron ion transport IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
BP GO:0016998 cell wall macromolecule catabolic process IEP HCCA
BP GO:0031503 protein-containing complex localization IEP HCCA
BP GO:0033566 gamma-tubulin complex localization IEP HCCA
CC GO:0033573 high-affinity iron permease complex IEP HCCA
BP GO:0034755 iron ion transmembrane transport IEP HCCA
BP GO:0044036 cell wall macromolecule metabolic process IEP HCCA
BP GO:0046348 amino sugar catabolic process IEP HCCA
MF GO:0046915 transition metal ion transmembrane transporter activity IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
BP GO:1901071 glucosamine-containing compound metabolic process IEP HCCA
BP GO:1901072 glucosamine-containing compound catabolic process IEP HCCA
BP GO:1901136 carbohydrate derivative catabolic process IEP HCCA
BP GO:1901565 organonitrogen compound catabolic process IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1905862 ferroxidase complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!