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  5. Sacu_v1.1_s0059.g015085

Sacu_v1.1_s0059.g015085


Description : not classified & original description: CDS=1-669


Gene families : OG0001676 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001676_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0059.g015085
Cluster HCCA: Cluster_57

Target Alias Description ECC score Gene Family Method Actions
Ala_g01361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01626 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre13.g602650 No alias Rhodanese-like domain-containing protein 11,... 0.02 OrthoFinder output from all 47 species
Dcu_g10468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os09g10750.1 LOC_Os09g10750 Rhodanese-like domain-containing protein 9,... 0.04 OrthoFinder output from all 47 species
MA_10436404g0010 No alias Rhodanese-like domain-containing protein 9,... 0.03 OrthoFinder output from all 47 species
Mp1g26470.1 No alias Rhodanese-like domain-containing protein 10... 0.02 OrthoFinder output from all 47 species
Ppi_g29259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22029 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0004592 pantoate-beta-alanine ligase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006575 cellular modified amino acid metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006979 response to oxidative stress IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0015939 pantothenate metabolic process IEP HCCA
BP GO:0015940 pantothenate biosynthetic process IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0016881 acid-amino acid ligase activity IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042398 cellular modified amino acid biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0072330 monocarboxylic acid biosynthetic process IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR001763 Rhodanese-like_dom 50 169
No external refs found!