1. Home
  2. Species
  3. Salvinia cucullata
  4. Sequence
  5. Sacu_v1.1_s0055.g014444

Sacu_v1.1_s0055.g014444 (HY4, ATCRY1, BLU1, OOP2, CRY1)


Aliases : HY4, ATCRY1, BLU1, OOP2, CRY1

Description : cryptochrome photoreceptor *(CRY) & original description: CDS=303-2156


Gene families : OG0000814 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000814_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0055.g014444
Cluster HCCA: Cluster_24

Target Alias Description ECC score Gene Family Method Actions
Aev_g18806 HY4, ATCRY1,... cryptochrome-DASH photoreceptor *(CRYD) & original... 0.02 OrthoFinder output from all 47 species
Als_g21204 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g12860 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G012600.1 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original... 0.03 OrthoFinder output from all 47 species
Ceric.23G028800.1 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original... 0.04 OrthoFinder output from all 47 species
Lfl_g03388 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10924 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g29981 HY4, ATCRY1,... cryptochrome photoreceptor *(CRY) & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39891 No alias cryptochrome photoreceptor *(CRY) & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g49498 HY4, ATCRY1,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e036961_P002 ATCRY2, CRY2,... cryptochrome photoreceptor (CRY) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0007155 cell adhesion IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0040008 regulation of growth IEP HCCA
BP GO:0045927 positive regulation of growth IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
BP GO:0048518 positive regulation of biological process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR005101 Cryptochr/Photolyase_FAD-bd 284 482
IPR006050 DNA_photolyase_N 6 160
No external refs found!