Aliases : LSH4
Description : plant-specific ALOG-type transcription factor & original description: CDS=1-1188
Gene families : OG0001118 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001118_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
Ceric.29G008000.1 | LSH4, Ceric.29G008000 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
GSVIVT01023521001 | No alias | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 4... | 0.02 | OrthoFinder output from all 47 species | |
Gb_15426 | LSH4 | Protein G1-like5 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g07030.1 | LSH4, LOC_Os02g07030 | Protein G1-like1 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species | |
LOC_Os02g56610.1 | LSH4, LOC_Os02g56610 | Protein G1-like6 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
Msp_g25188 | LSH6 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g32132 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g53162 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Sacu_v1.1_s0149.g023275 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Smo36560 | No alias | Protein G1-like4 OS=Oryza sativa subsp. indica | 0.03 | OrthoFinder output from all 47 species | |
Solyc07g062470.4.1 | LSH10, Solyc07g062470 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... | 0.05 | OrthoFinder output from all 47 species | |
Solyc07g150147.1.1 | LSH10, Solyc07g150147 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... | 0.03 | OrthoFinder output from all 47 species | |
Solyc10g008000.1.1 | LSH10, Solyc10g008000 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... | 0.03 | OrthoFinder output from all 47 species | |
Solyc12g014260.1.1 | LSH10, Solyc12g014260 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 10... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g07735 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Spa_g22798 | LSH4 | plant-specific ALOG-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e012687_P001 | LSH4, Zm00001e012687 | Protein LIGHT-DEPENDENT SHORT HYPOCOTYLS 3... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e019403_P001 | LSH6, Zm00001e019403 | Protein G1-like7 OS=Oryza sativa subsp. indica... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e027283_P001 | LSH6, Zm00001e027283 | Protein G1-like8 OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
Zm00001e030343_P002 | LSH4, Zm00001e030343 | Protein G1-like2 OS=Oryza sativa subsp. indica... | 0.03 | OrthoFinder output from all 47 species | |
Zm00001e032784_P001 | LSH6, Zm00001e032784 | Protein G1 OS=Oryza sativa subsp. japonica... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004332 | fructose-bisphosphate aldolase activity | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
MF | GO:0015098 | molybdate ion transmembrane transporter activity | IEP | HCCA |
MF | GO:0015103 | inorganic anion transmembrane transporter activity | IEP | HCCA |
BP | GO:0015689 | molybdate ion transport | IEP | HCCA |
BP | GO:0015698 | inorganic anion transport | IEP | HCCA |
BP | GO:0016052 | carbohydrate catabolic process | IEP | HCCA |
MF | GO:0016491 | oxidoreductase activity | IEP | HCCA |
MF | GO:0016832 | aldehyde-lyase activity | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR006936 | ALOG_dom | 48 | 192 |
No external refs found! |