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  5. Sacu_v1.1_s0045.g013177

Sacu_v1.1_s0045.g013177 (MEE24, AtWRKY35, WRKY35)


Aliases : MEE24, AtWRKY35, WRKY35

Description : WRKY-type transcription factor & original description: CDS=1017-2516


Gene families : OG0000132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0045.g013177
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Aev_g02296 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene38323.t1 MEE24, AtWRKY35,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05957 ATWRKY11, WRKY11 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os03g53050.1 WRKY39,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Msp_g25418 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g37285 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0180.g024809 MEE24, AtWRKY35, WRKY35 WRKY-type transcription factor & original description: CDS=1-1548 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003690 double-stranded DNA binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 282 339
No external refs found!