Sacu_v1.1_s0044.g012965 (UBP25)

Aliases : UBP25

Description : component *(bL25m) of large mitoribosomal-subunit proteome & original description: CDS=633-2600

Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0044.g012965

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00135p00021060	UBP16,...	Protein degradation.peptidase families.cysteine-type...	0.02	OrthoFinder output from all 47 species
Adi_g013897	UBP25	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g080212	UBP23	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g11746	UBP25	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene54061.t1	UBP23, Aspi01Gene54061	deubiquitinase *(UBP23) & original description: none	0.03	OrthoFinder output from all 47 species
Cre06.g248950	UBP25	Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana	0.01	OrthoFinder output from all 47 species
Dcu_g26398	UBP23	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Len_g01378	UBP25	deubiquitinase *(UBP25) & original description: none	0.02	OrthoFinder output from all 47 species
MA_127079g0010	UBP25	Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
MA_842793g0010	UBP23	Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Mp1g03220.1	UBP25	Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis...	0.02	OrthoFinder output from all 47 species
Sam_g09289	No alias	deubiquitinase *(UBP23) & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e022516_P001	UBP17, Zm00001e022516	deubiquitinase (UBP15-21)	0.03	OrthoFinder output from all 47 species
Zm00001e027381_P003	UBP25, Zm00001e027381	deubiquitinase (UBP25)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004843	cysteine-type deubiquitinase activity	IEA	Interproscan
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008233	peptidase activity	None	Extended
MF	GO:0008234	cysteine-type peptidase activity	None	Extended
BP	GO:0016579	protein deubiquitination	IEA	Interproscan
MF	GO:0016787	hydrolase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019783	ubiquitin-like protein peptidase activity	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070646	protein modification by small protein removal	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0101005	deubiquitinase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0000774	adenyl-nucleotide exchange factor activity	IEP	HCCA
MF	GO:0003876	AMP deaminase activity	IEP	HCCA
MF	GO:0004045	aminoacyl-tRNA hydrolase activity	IEP	HCCA
MF	GO:0004652	polynucleotide adenylyltransferase activity	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006188	IMP biosynthetic process	IEP	HCCA
BP	GO:0006457	protein folding	IEP	HCCA
MF	GO:0008270	zinc ion binding	IEP	HCCA
BP	GO:0009123	nucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009124	nucleoside monophosphate biosynthetic process	IEP	HCCA
BP	GO:0009126	purine nucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009127	purine nucleoside monophosphate biosynthetic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009156	ribonucleoside monophosphate biosynthetic process	IEP	HCCA
BP	GO:0009161	ribonucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009167	purine ribonucleoside monophosphate metabolic process	IEP	HCCA
BP	GO:0009168	purine ribonucleoside monophosphate biosynthetic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016814	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines	IEP	HCCA
MF	GO:0016832	aldehyde-lyase activity	IEP	HCCA
MF	GO:0019239	deaminase activity	IEP	HCCA
BP	GO:0032261	purine nucleotide salvage	IEP	HCCA
BP	GO:0032264	IMP salvage	IEP	HCCA
MF	GO:0042802	identical protein binding	IEP	HCCA
MF	GO:0042803	protein homodimerization activity	IEP	HCCA
BP	GO:0043094	cellular metabolic compound salvage	IEP	HCCA
BP	GO:0043101	purine-containing compound salvage	IEP	HCCA
BP	GO:0043173	nucleotide salvage	IEP	HCCA
BP	GO:0043631	RNA polyadenylation	IEP	HCCA
BP	GO:0046040	IMP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
MF	GO:0046914	transition metal ion binding	IEP	HCCA
MF	GO:0047623	adenosine-phosphate deaminase activity	IEP	HCCA
MF	GO:0050661	NADP binding	IEP	HCCA
MF	GO:0051087	chaperone binding	IEP	HCCA
MF	GO:0060590	ATPase regulator activity	IEP	HCCA
MF	GO:0070566	adenylyltransferase activity	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
BP	GO:0106380	purine ribonucleotide salvage	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001394	Peptidase_C19_UCH	22	318

External Links

No external refs found!

Sacu_v1.1_s0044.g012965 (UBP25)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation