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  5. Sacu_v1.1_s0039.g012200

Sacu_v1.1_s0039.g012200


Description : AHL clade-B transcription factor & original description: CDS=399-1508


Gene families : OG0000263 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000263_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0039.g012200
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
Adi_g024982 ATAHL1, AHL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07099 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g19432 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08550 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g22194 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene63975.t2 Aspi01Gene63975 AHL clade-B transcription factor & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g05187 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G059800.1 Ceric.05G059800 AHL clade-B transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g15941 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14342 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g02074 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g10122 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10262 No alias AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10736 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03019 ATAHL1, AHL1 AHL clade-B transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010139 No alias AHL clade-B transcription factor & original description:... 0.01 OrthoFinder output from all 47 species
Sam_g30026 No alias AHL clade-B transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo410086 No alias AT-hook motif nuclear-localized protein 10... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0016485 protein processing IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
MF GO:0032977 membrane insertase activity IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0140104 molecular carrier activity IEP HCCA
MF GO:0140597 protein carrier chaperone IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005175 PPC_dom 163 276
No external refs found!