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  5. Sacu_v1.1_s0037.g011895

Sacu_v1.1_s0037.g011895


Description : clade E phosphatase & original description: CDS=1-1494


Gene families : OG0000149 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000149_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0037.g011895
Cluster HCCA: Cluster_54

Target Alias Description ECC score Gene Family Method Actions
Azfi_s0031.g024440 No alias clade E phosphatase & original description: CDS=386-1780 0.03 OrthoFinder output from all 47 species
Dde_g26040 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07988 No alias clade E phosphatase & original description: none 0.03 OrthoFinder output from all 47 species
MA_18503g0010 No alias Probable protein phosphatase 2C 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Sam_g35386 No alias clade E phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Solyc10g076320.3.1 Solyc10g076320 clade E phosphatase 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004826 phenylalanine-tRNA ligase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006432 phenylalanyl-tRNA aminoacylation IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 139 386
No external refs found!