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  5. Sacu_v1.1_s0035.g011357

Sacu_v1.1_s0035.g011357


Description : Met-tRNA positioning component *(eIF5B) of initiator tRNA carrier complex & original description: CDS=268-4416


Gene families : OG0003112 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003112_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0035.g011357

Target Alias Description ECC score Gene Family Method Actions
Aop_g09056 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g35971 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.04 OrthoFinder output from all 47 species
Cre02.g078100 No alias Protein biosynthesis.translation initiation.eIF5B... 0.01 OrthoFinder output from all 47 species
Dac_g13418 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.02 OrthoFinder output from all 47 species
Spa_g56625 No alias Met-tRNA positioning component *(eIF5B) of initiator... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP HCCA
BP GO:0001510 RNA methylation IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP HCCA
MF GO:0005347 ATP transmembrane transporter activity IEP HCCA
MF GO:0005471 ATP:ADP antiporter activity IEP HCCA
CC GO:0005852 eukaryotic translation initiation factor 3 complex IEP HCCA
BP GO:0006400 tRNA modification IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006862 nucleotide transport IEP HCCA
BP GO:0008033 tRNA processing IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008514 organic anion transmembrane transporter activity IEP HCCA
BP GO:0009451 RNA modification IEP HCCA
MF GO:0015215 nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP HCCA
MF GO:0015217 ADP transmembrane transporter activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP HCCA
BP GO:0015748 organophosphate ester transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0030488 tRNA methylation IEP HCCA
MF GO:0031369 translation initiation factor binding IEP HCCA
CC GO:0031515 tRNA (m1A) methyltransferase complex IEP HCCA
BP GO:0032259 methylation IEP HCCA
CC GO:0034708 methyltransferase complex IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
CC GO:0043527 tRNA methyltransferase complex IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR004161 EFTu-like_2 1171 1257
IPR000795 T_Tr_GTP-bd_dom 938 1143
No external refs found!