Sacu_v1.1_s0034.g011303


Description : not classified & original description: CDS=348-2951


Gene families : OG0004902 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004902_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0034.g011303
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
Als_g12087 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13951 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g37410 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.17G006000.1 Ceric.17G006000 not classified & original description: pacid=50617872... 0.03 OrthoFinder output from all 47 species
Dcu_g11941 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Gb_23470 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Len_g10765 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_128292g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp7g08850.1 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Ore_g36831 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37164 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc06g071040.4.1 Solyc06g071040 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
MF GO:0008569 minus-end-directed microtubule motor activity IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!