Sacu_v1.1_s0030.g010514 (CLC-D, ATCLC-D)

Aliases : CLC-D, ATCLC-D

Description : anion channel / anion:proton antiporter *(CLC) & original description: CDS=642-2078

Gene families : OG0000501 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000501_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sacu_v1.1_s0030.g010514
Cluster	HCCA: Cluster_66

Target	Alias	Description	ECC score	Gene Family Method
Cpa\|evm.model.tig00001126.4	No alias	Chloride channel protein CLC-c OS=Arabidopsis thaliana	0.02	OrthoFinder output from all 47 species
Cre01.g038700	CLC-D, ATCLC-D	Solute transport.carrier-mediated transport.CLC anion...	0.01	OrthoFinder output from all 47 species
Cre09.g404100	CLC-D, ATCLC-D	Solute transport.carrier-mediated transport.CLC anion...	0.01	OrthoFinder output from all 47 species
Dac_g16210	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Len_g39981	CLC-D, ATCLC-D	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Msp_g14116	CLC-D, ATCLC-D	anion channel / anion:proton antiporter *(CLC) &...	0.03	OrthoFinder output from all 47 species
Ore_g09753	ATCLC-C, CLC-C	anion channel / anion:proton antiporter *(CLC) &...	0.02	OrthoFinder output from all 47 species
Smo100906	ATCLC-C, CLC-C	Solute transport.carrier-mediated transport.CLC anion...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005216	monoatomic ion channel activity	None	Extended
MF	GO:0005244	voltage-gated monoatomic ion channel activity	None	Extended
MF	GO:0005247	voltage-gated chloride channel activity	IEA	Interproscan
MF	GO:0005253	monoatomic anion channel activity	None	Extended
MF	GO:0005254	chloride channel activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006810	transport	None	Extended
BP	GO:0006811	monoatomic ion transport	None	Extended
BP	GO:0006820	monoatomic anion transport	None	Extended
BP	GO:0006821	chloride transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
MF	GO:0008308	voltage-gated monoatomic anion channel activity	None	Extended
MF	GO:0008509	monoatomic anion transmembrane transporter activity	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015075	monoatomic ion transmembrane transporter activity	None	Extended
MF	GO:0015103	inorganic anion transmembrane transporter activity	None	Extended
MF	GO:0015108	chloride transmembrane transporter activity	None	Extended
MF	GO:0015267	channel activity	None	Extended
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	None	Extended
BP	GO:0015698	inorganic anion transport	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0022803	passive transmembrane transporter activity	None	Extended
MF	GO:0022832	voltage-gated channel activity	None	Extended
MF	GO:0022836	gated channel activity	None	Extended
MF	GO:0022839	monoatomic ion gated channel activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
CC	GO:0110165	cellular anatomical entity	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000139	Golgi membrane	IEP	HCCA
BP	GO:0000375	RNA splicing, via transesterification reactions	IEP	HCCA
BP	GO:0000377	RNA splicing, via transesterification reactions with bulged adenosine as nucleophile	IEP	HCCA
BP	GO:0000398	mRNA splicing, via spliceosome	IEP	HCCA
MF	GO:0003924	GTPase activity	IEP	HCCA
MF	GO:0003993	acid phosphatase activity	IEP	HCCA
MF	GO:0004888	transmembrane signaling receptor activity	IEP	HCCA
MF	GO:0004970	ionotropic glutamate receptor activity	IEP	HCCA
MF	GO:0005230	extracellular ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0006891	intra-Golgi vesicle-mediated transport	IEP	HCCA
MF	GO:0008066	glutamate receptor activity	IEP	HCCA
BP	GO:0008380	RNA splicing	IEP	HCCA
MF	GO:0009678	pyrophosphate hydrolysis-driven proton transmembrane transporter activity	IEP	HCCA
MF	GO:0015276	ligand-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0016409	palmitoyltransferase activity	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016780	phosphotransferase activity, for other substituted phosphate groups	IEP	HCCA
MF	GO:0016791	phosphatase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0019829	ATPase-coupled monoatomic cation transmembrane transporter activity	IEP	HCCA
MF	GO:0022824	transmitter-gated monoatomic ion channel activity	IEP	HCCA
MF	GO:0022834	ligand-gated channel activity	IEP	HCCA
MF	GO:0022835	transmitter-gated channel activity	IEP	HCCA
MF	GO:0022853	active monoatomic ion transmembrane transporter activity	IEP	HCCA
CC	GO:0030532	small nuclear ribonucleoprotein complex	IEP	HCCA
MF	GO:0030594	neurotransmitter receptor activity	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0038023	signaling receptor activity	IEP	HCCA
MF	GO:0042578	phosphoric ester hydrolase activity	IEP	HCCA
MF	GO:0042625	ATPase-coupled ion transmembrane transporter activity	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0044769	ATPase activity, coupled to transmembrane movement of ions, rotational mechanism	IEP	HCCA
CC	GO:0046540	U4/U6 x U5 tri-snRNP complex	IEP	HCCA
MF	GO:0046961	proton-transporting ATPase activity, rotational mechanism	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
BP	GO:0051726	regulation of cell cycle	IEP	HCCA
MF	GO:0060089	molecular transducer activity	IEP	HCCA
CC	GO:0097525	spliceosomal snRNP complex	IEP	HCCA
CC	GO:0097526	spliceosomal tri-snRNP complex	IEP	HCCA
CC	GO:0098588	bounding membrane of organelle	IEP	HCCA
CC	GO:0120114	Sm-like protein family complex	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000644	CBS_dom	125	171
IPR001807	Cl-channel_volt-gated	56	476

External Links

No external refs found!

Sacu_v1.1_s0030.g010514 (CLC-D, ATCLC-D)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation