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  5. Sacu_v1.1_s0029.g010226

Sacu_v1.1_s0029.g010226 (MEE32, EMB3004)


Aliases : MEE32, EMB3004

Description : 3-dehydroquinate dehydratase and shikimate dehydrogenase & original description: CDS=355-1890


Gene families : OG0001444 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001444_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0029.g010226

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00057p00139480 MEE32, EMB3004,... Amino acid metabolism.biosynthesis.shikimate... 0.03 OrthoFinder output from all 47 species
Aev_g25334 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Als_g16496 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.01 OrthoFinder output from all 47 species
GSVIVT01021979001 MEE32, EMB3004 Amino acid metabolism.biosynthesis.shikimate... 0.01 OrthoFinder output from all 47 species
LOC_Os01g27770.1 MEE32, EMB3004,... 3-dehydroquinate dehydratase and shikimate dehydrogenase 0.02 OrthoFinder output from all 47 species
Lfl_g04744 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Msp_g08103 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.03 OrthoFinder output from all 47 species
Spa_g22046 MEE32, EMB3004 3-dehydroquinate dehydratase and shikimate dehydrogenase... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003855 3-dehydroquinate dehydratase activity IEA Interproscan
MF GO:0004764 shikimate 3-dehydrogenase (NADP+) activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005085 guanyl-nucleotide exchange factor activity IEP HCCA
BP GO:0006694 steroid biosynthetic process IEP HCCA
BP GO:0006801 superoxide metabolic process IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
BP GO:0008202 steroid metabolic process IEP HCCA
BP GO:0016125 sterol metabolic process IEP HCCA
BP GO:0016126 sterol biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016628 oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016840 carbon-nitrogen lyase activity IEP HCCA
MF GO:0016843 amine-lyase activity IEP HCCA
MF GO:0016844 strictosidine synthase activity IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0051087 chaperone binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
BP GO:0072593 reactive oxygen species metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR013708 Shikimate_DH-bd_N 241 321
IPR001381 DHquinase_I 10 227
IPR041121 SDH_C 478 507
IPR006151 Shikm_DH/Glu-tRNA_Rdtase 357 416
No external refs found!