Description : not classified & original description: CDS=1-2874
Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Sacu_v1.1_s0027.g009761 | |
Cluster | HCCA: Cluster_35 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00003p00032470 | No alias | Pentatricopeptide repeat-containing protein At1g25360... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00010p00262470 | OTP85 | Pentatricopeptide repeat-containing protein At2g02980,... | 0.02 | OrthoFinder output from all 47 species | |
AMTR_s00030p00109240 | evm_27.TU.AmTr_v1... | Putative pentatricopeptide repeat-containing protein... | 0.02 | OrthoFinder output from all 47 species | |
Aspi01Gene55840.t1 | Aspi01Gene55840 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Azfi_s3912.g117324 | No alias | not classified & original description: CDS=1-774 | 0.02 | OrthoFinder output from all 47 species | |
Cba_g34541 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
Ceric.25G070400.1 | Ceric.25G070400 | not classified & original description: pacid=50594567... | 0.04 | OrthoFinder output from all 47 species | |
Dde_g03413 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g05950 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Dde_g08457 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Len_g54937 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Sam_g12246 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
Smo123298 | OTP84 | Pentatricopeptide repeat-containing protein At1g11290,... | 0.03 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0000276 | mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
BP | GO:0009141 | nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009144 | purine nucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009150 | purine ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
BP | GO:0009199 | ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009205 | purine ribonucleoside triphosphate metabolic process | IEP | HCCA |
BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
BP | GO:0009259 | ribonucleotide metabolic process | IEP | HCCA |
BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
MF | GO:0015078 | proton transmembrane transporter activity | IEP | HCCA |
BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
BP | GO:0019693 | ribose phosphate metabolic process | IEP | HCCA |
CC | GO:0033177 | proton-transporting two-sector ATPase complex, proton-transporting domain | IEP | HCCA |
CC | GO:0045263 | proton-transporting ATP synthase complex, coupling factor F(o) | IEP | HCCA |
BP | GO:0046034 | ATP metabolic process | IEP | HCCA |
BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
BP | GO:0090407 | organophosphate biosynthetic process | IEP | HCCA |
CC | GO:0098798 | mitochondrial protein-containing complex | IEP | HCCA |
CC | GO:0098800 | inner mitochondrial membrane protein complex | IEP | HCCA |
BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 152 | 173 |
IPR002885 | Pentatricopeptide_repeat | 761 | 785 |
IPR002885 | Pentatricopeptide_repeat | 558 | 581 |
IPR002885 | Pentatricopeptide_repeat | 660 | 682 |
IPR002885 | Pentatricopeptide_repeat | 380 | 428 |
IPR002885 | Pentatricopeptide_repeat | 786 | 834 |
IPR002885 | Pentatricopeptide_repeat | 279 | 325 |
IPR002885 | Pentatricopeptide_repeat | 481 | 528 |
IPR002885 | Pentatricopeptide_repeat | 584 | 631 |
IPR002885 | Pentatricopeptide_repeat | 177 | 224 |
IPR002885 | Pentatricopeptide_repeat | 75 | 121 |
IPR002885 | Pentatricopeptide_repeat | 686 | 730 |
No external refs found! |