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  5. Sacu_v1.1_s0026.g009549

Sacu_v1.1_s0026.g009549 (FdC1)


Aliases : FdC1

Description : ferredoxin targeted to non-NADP reduction & original description: CDS=81-641


Gene families : OG0007770 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007770_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0026.g009549

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00045p00150380 FdC1,... Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
AT1G32550 FdC1 2Fe-2S ferredoxin-like superfamily protein 0.1 OrthoFinder output from all 47 species
Adi_g043788 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.07 OrthoFinder output from all 47 species
Ala_g06893 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.07 OrthoFinder output from all 47 species
Aob_g00791 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.06 OrthoFinder output from all 47 species
Aop_g09107 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Cba_g20079 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Dac_g00249 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01013191001 FdC1 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana 0.07 OrthoFinder output from all 47 species
LOC_Os03g48040.1 FdC1, LOC_Os03g48040 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana... 0.08 OrthoFinder output from all 47 species
Lfl_g02653 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Mp2g18370.1 FdC1 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana... 0.06 OrthoFinder output from all 47 species
Msp_g02999 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Nbi_g14134 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Ore_g04929 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Pnu_g00351 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.05 OrthoFinder output from all 47 species
Ppi_g18540 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.04 OrthoFinder output from all 47 species
Sam_g25831 No alias ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Solyc08g077050.3.1 FdC1, Solyc08g077050 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g00162 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.02 OrthoFinder output from all 47 species
Tin_g03053 FdC1 ferredoxin targeted to non-NADP reduction & original... 0.03 OrthoFinder output from all 47 species
Zm00001e012273_P001 FdC1, Zm00001e012273 Ferredoxin C 2, chloroplastic OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0051536 iron-sulfur cluster binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006771 riboflavin metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009231 riboflavin biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0010109 regulation of photosynthesis IEP HCCA
BP GO:0010207 photosystem II assembly IEP HCCA
MF GO:0010242 oxygen evolving activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016829 lyase activity IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042548 regulation of photosynthesis, light reaction IEP HCCA
BP GO:0042549 photosystem II stabilization IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0042726 flavin-containing compound metabolic process IEP HCCA
BP GO:0042727 flavin-containing compound biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043467 regulation of generation of precursor metabolites and energy IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
CC GO:0098533 ATPase dependent transmembrane transport complex IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1902495 transmembrane transporter complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
CC GO:1990351 transporter complex IEP HCCA
InterPro domains Description Start Stop
IPR001041 2Fe-2S_ferredoxin-type 74 143
No external refs found!