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  5. Sacu_v1.1_s0023.g008894

Sacu_v1.1_s0023.g008894


Description : not classified & original description: CDS=130-1383


Gene families : OG0001186 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001186_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0023.g008894

Target Alias Description ECC score Gene Family Method Actions
Ceric.09G054100.1 Ceric.09G054100 not classified & original description: pacid=50588225... 0.03 OrthoFinder output from all 47 species
Ceric.16G062500.1 Ceric.16G062500 not classified & original description: pacid=50588736... 0.03 OrthoFinder output from all 47 species
Ceric.33G013800.1 Ceric.33G013800 not classified & original description: pacid=50606974... 0.03 OrthoFinder output from all 47 species
Dde_g33522 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035570001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os04g37520.1 LOC_Os04g37520 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g03430.2 LOC_Os08g03430 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Nbi_g02185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007979_P001 Zm00001e007979 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006820 monoatomic anion transport IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR021924 DUF3537 33 394
No external refs found!