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Description : not classified & original description: none
Gene families : OG0000473 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000473_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Ehy_g06309 | |
| Cluster | HCCA: Cluster_1 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G04560 | No alias | AWPM-19-like family protein | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g011454 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g40517 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01031072001 | No alias | Membrane protein PM19L OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
| Gb_35411 | No alias | Membrane protein PM19L OS=Oryza sativa subsp. japonica... | 0.04 | OrthoFinder output from all 47 species | |
| Len_g19919 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g39696 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_101266g0010 | No alias | Membrane protein PM19L OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| MA_105516g0020 | No alias | Membrane protein PM19L OS=Oryza sativa subsp. japonica... | 0.02 | OrthoFinder output from all 47 species | |
| MA_16601g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_199g0010 | No alias | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species | |
| MA_746222g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_7840101g0010 | No alias | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g06734 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g13698 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ppi_g63497 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0019.g007798 | No alias | not classified & original description: CDS=1-543 | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g00344 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Smo37585 | No alias | Membrane protein PM19L OS=Oryza sativa subsp. japonica | 0.05 | OrthoFinder output from all 47 species | |
| Spa_g04019 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
| BP | GO:0002100 | tRNA wobble adenosine to inosine editing | IEP | HCCA |
| MF | GO:0004000 | adenosine deaminase activity | IEP | HCCA |
| MF | GO:0004518 | nuclease activity | IEP | HCCA |
| MF | GO:0004519 | endonuclease activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006308 | DNA catabolic process | IEP | HCCA |
| BP | GO:0006382 | adenosine to inosine editing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| MF | GO:0008251 | tRNA-specific adenosine deaminase activity | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0016553 | base conversion or substitution editing | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | HCCA |
| MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | HCCA |
| MF | GO:0019239 | deaminase activity | IEP | HCCA |
| BP | GO:0019439 | aromatic compound catabolic process | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034655 | nucleobase-containing compound catabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044265 | cellular macromolecule catabolic process | IEP | HCCA |
| BP | GO:0044270 | cellular nitrogen compound catabolic process | IEP | HCCA |
| BP | GO:0046700 | heterocycle catabolic process | IEP | HCCA |
| MF | GO:0050660 | flavin adenine dinucleotide binding | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:1901361 | organic cyclic compound catabolic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR008390 | AWPM-19 | 15 | 144 |
| No external refs found! |