Aliases : TLP18.3
Description : protein involved in PS-II assembly *(Psb32) & original description: CDS=348-1229
Gene families : OG0007030 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007030_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AMTR_s00025p00126870 | TLP18.3,... | Photosynthesis.photophosphorylation.photosystem... | 0.1 | OrthoFinder output from all 47 species | |
AT1G54780 | TLP18.3 | thylakoid lumen 18.3 kDa protein | 0.06 | OrthoFinder output from all 47 species | |
Adi_g001945 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.09 | OrthoFinder output from all 47 species | |
Aev_g07030 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.06 | OrthoFinder output from all 47 species | |
Ala_g01414 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.08 | OrthoFinder output from all 47 species | |
Als_g32115 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.09 | OrthoFinder output from all 47 species | |
Aob_g07689 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.04 | OrthoFinder output from all 47 species | |
Aop_g08442 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.06 | OrthoFinder output from all 47 species | |
Aspi01Gene13421.t1 | TLP18.3, Aspi01Gene13421 | protein involved in PS-II assembly *(Psb32) & original... | 0.04 | OrthoFinder output from all 47 species | |
Azfi_s0054.g033664 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.06 | OrthoFinder output from all 47 species | |
Cba_g08697 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.07 | OrthoFinder output from all 47 species | |
Ceric.05G027600.1 | TLP18.3, Ceric.05G027600 | protein involved in PS-II assembly *(Psb32) & original... | 0.07 | OrthoFinder output from all 47 species | |
Cre03.g182150 | TLP18.3 | Photosynthesis.photophosphorylation.photosystem... | 0.04 | OrthoFinder output from all 47 species | |
Dac_g09996 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.05 | OrthoFinder output from all 47 species | |
Dcu_g00821 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.06 | OrthoFinder output from all 47 species | |
Dde_g47338 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.05 | OrthoFinder output from all 47 species | |
Ehy_g06594 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.08 | OrthoFinder output from all 47 species | |
GSVIVT01000004001 | TLP18.3 | Photosynthesis.photophosphorylation.photosystem... | 0.05 | OrthoFinder output from all 47 species | |
LOC_Os05g33280.1 | TLP18.3, LOC_Os05g33280 | Psb32 protein involved in PS-II assembly | 0.08 | OrthoFinder output from all 47 species | |
Len_g16675 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.05 | OrthoFinder output from all 47 species | |
Lfl_g03752 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.07 | OrthoFinder output from all 47 species | |
MA_10433010g0010 | TLP18.3 | Psb32 protein involved in PS-II assembly | 0.06 | OrthoFinder output from all 47 species | |
Mp8g16080.1 | TLP18.3 | Psb32 protein involved in PS-II assembly | 0.04 | OrthoFinder output from all 47 species | |
Msp_g03092 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.06 | OrthoFinder output from all 47 species | |
Nbi_g17006 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.07 | OrthoFinder output from all 47 species | |
Pir_g00411 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.08 | OrthoFinder output from all 47 species | |
Pnu_g12645 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.08 | OrthoFinder output from all 47 species | |
Pp3c11_19220V3.1 | TLP18.3, Pp3c11_19220 | thylakoid lumen 18.3 kDa protein | 0.02 | OrthoFinder output from all 47 species | |
Ppi_g17567 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.07 | OrthoFinder output from all 47 species | |
Sam_g08275 | No alias | protein involved in PS-II assembly *(Psb32) & original... | 0.05 | OrthoFinder output from all 47 species | |
Smo127459 | TLP18.3 | Photosynthesis.photophosphorylation.photosystem... | 0.03 | OrthoFinder output from all 47 species | |
Solyc01g098640.3.1 | TLP18.3, Solyc01g098640 | Psb32 protein involved in PS-II assembly | 0.08 | OrthoFinder output from all 47 species | |
Spa_g05586 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.09 | OrthoFinder output from all 47 species | |
Spa_g05587 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.1 | OrthoFinder output from all 47 species | |
Tin_g07118 | TLP18.3 | protein involved in PS-II assembly *(Psb32) & original... | 0.09 | OrthoFinder output from all 47 species | |
Zm00001e026820_P001 | TLP18.3, Zm00001e026820 | Psb32 protein involved in PS-II assembly | 0.09 | OrthoFinder output from all 47 species |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
MF | GO:0004176 | ATP-dependent peptidase activity | IEP | HCCA |
MF | GO:0004222 | metalloendopeptidase activity | IEP | HCCA |
MF | GO:0004618 | phosphoglycerate kinase activity | IEP | HCCA |
MF | GO:0005198 | structural molecule activity | IEP | HCCA |
CC | GO:0005575 | cellular_component | IEP | HCCA |
CC | GO:0005840 | ribosome | IEP | HCCA |
BP | GO:0006090 | pyruvate metabolic process | IEP | HCCA |
BP | GO:0006096 | glycolytic process | IEP | HCCA |
BP | GO:0006165 | nucleoside diphosphate phosphorylation | IEP | HCCA |
BP | GO:0006412 | translation | IEP | HCCA |
BP | GO:0006488 | dolichol-linked oligosaccharide biosynthetic process | IEP | HCCA |
BP | GO:0006490 | oligosaccharide-lipid intermediate biosynthetic process | IEP | HCCA |
BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
BP | GO:0006757 | ATP generation from ADP | IEP | HCCA |
BP | GO:0006801 | superoxide metabolic process | IEP | HCCA |
BP | GO:0008150 | biological_process | IEP | HCCA |
BP | GO:0008152 | metabolic process | IEP | HCCA |
BP | GO:0009132 | nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009135 | purine nucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009179 | purine ribonucleoside diphosphate metabolic process | IEP | HCCA |
BP | GO:0009185 | ribonucleoside diphosphate metabolic process | IEP | HCCA |
CC | GO:0009521 | photosystem | IEP | HCCA |
CC | GO:0009523 | photosystem II | IEP | HCCA |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
BP | GO:0009987 | cellular process | IEP | HCCA |
BP | GO:0010109 | regulation of photosynthesis | IEP | HCCA |
BP | GO:0010207 | photosystem II assembly | IEP | HCCA |
MF | GO:0010242 | oxygen evolving activity | IEP | HCCA |
BP | GO:0015979 | photosynthesis | IEP | HCCA |
CC | GO:0016020 | membrane | IEP | HCCA |
BP | GO:0016043 | cellular component organization | IEP | HCCA |
MF | GO:0016774 | phosphotransferase activity, carboxyl group as acceptor | IEP | HCCA |
MF | GO:0016866 | intramolecular transferase activity | IEP | HCCA |
MF | GO:0016868 | intramolecular transferase activity, phosphotransferases | IEP | HCCA |
BP | GO:0022607 | cellular component assembly | IEP | HCCA |
CC | GO:0032991 | protein-containing complex | IEP | HCCA |
CC | GO:0034357 | photosynthetic membrane | IEP | HCCA |
BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
BP | GO:0042548 | regulation of photosynthesis, light reaction | IEP | HCCA |
BP | GO:0042549 | photosystem II stabilization | IEP | HCCA |
CC | GO:0042651 | thylakoid membrane | IEP | HCCA |
BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
CC | GO:0043190 | ATP-binding cassette (ABC) transporter complex | IEP | HCCA |
CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
BP | GO:0043467 | regulation of generation of precursor metabolites and energy | IEP | HCCA |
BP | GO:0043603 | amide metabolic process | IEP | HCCA |
BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
BP | GO:0046031 | ADP metabolic process | IEP | HCCA |
BP | GO:0046939 | nucleotide phosphorylation | IEP | HCCA |
BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
BP | GO:0072593 | reactive oxygen species metabolic process | IEP | HCCA |
CC | GO:0098533 | ATPase dependent transmembrane transport complex | IEP | HCCA |
CC | GO:0098796 | membrane protein complex | IEP | HCCA |
CC | GO:0098797 | plasma membrane protein complex | IEP | HCCA |
CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
BP | GO:1901135 | carbohydrate derivative metabolic process | IEP | HCCA |
BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
CC | GO:1902494 | catalytic complex | IEP | HCCA |
CC | GO:1902495 | transmembrane transporter complex | IEP | HCCA |
CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
CC | GO:1990351 | transporter complex | IEP | HCCA |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR007621 | TPM_dom | 108 | 232 |
No external refs found! |