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  5. Sacu_v1.1_s0017.g007234

Sacu_v1.1_s0017.g007234 (CPSAR1, EMB269, ATOBGC)


Aliases : CPSAR1, EMB269, ATOBGC

Description : regulatory GTPase (OBGL) of thylakoid biogenesis & original description: CDS=1295-3559


Gene families : OG0006728 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006728_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0017.g007234

Target Alias Description ECC score Gene Family Method Actions
AT5G18570 CPSAR1, EMB269, ATOBGC GTP1/OBG family protein 0.03 OrthoFinder output from all 47 species
Adi_g015469 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Aev_g15248 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Ala_g08076 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Aop_g21160 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.05 OrthoFinder output from all 47 species
Azfi_s0143.g051498 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Cba_g14040 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Ceric.37G033700.1 CPSAR1, EMB269,... regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.04 OrthoFinder output from all 47 species
Dcu_g24277 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Gb_36197 CPSAR1, EMB269, ATOBGC GTP-binding protein OBGC, chloroplastic OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os07g47300.1 CPSAR1, EMB269,... Probable GTP-binding protein OBGC1, chloroplastic... 0.04 OrthoFinder output from all 47 species
Len_g25980 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
MA_10437260g0010 CPSAR1, EMB269, ATOBGC GTP-binding protein OBGC, chloroplastic OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Mp5g07180.1 CPSAR1, EMB269, ATOBGC Probable GTP-binding protein OBGC1, chloroplastic... 0.05 OrthoFinder output from all 47 species
Ore_g16896 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.06 OrthoFinder output from all 47 species
Sam_g30139 No alias regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.03 OrthoFinder output from all 47 species
Spa_g26108 CPSAR1, EMB269, ATOBGC regulatory GTPase (OBGL) of thylakoid biogenesis &... 0.02 OrthoFinder output from all 47 species
Zm00001e010930_P002 CPSAR1, EMB269,... Probable GTP-binding protein OBGC1, chloroplastic... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004019 adenylosuccinate synthase activity IEP HCCA
MF GO:0004109 coproporphyrinogen oxidase activity IEP HCCA
MF GO:0004749 ribose phosphate diphosphokinase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0004813 alanine-tRNA ligase activity IEP HCCA
MF GO:0004853 uroporphyrinogen decarboxylase activity IEP HCCA
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006399 tRNA metabolic process IEP HCCA
BP GO:0006419 alanyl-tRNA aminoacylation IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0006605 protein targeting IEP HCCA
BP GO:0006612 protein targeting to membrane IEP HCCA
BP GO:0006613 cotranslational protein targeting to membrane IEP HCCA
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006778 porphyrin-containing compound metabolic process IEP HCCA
BP GO:0006779 porphyrin-containing compound biosynthetic process IEP HCCA
MF GO:0008134 transcription factor binding IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP HCCA
MF GO:0016778 diphosphotransferase activity IEP HCCA
MF GO:0016831 carboxy-lyase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP HCCA
MF GO:0017025 TBP-class protein binding IEP HCCA
BP GO:0018130 heterocycle biosynthetic process IEP HCCA
BP GO:0019438 aromatic compound biosynthetic process IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0033013 tetrapyrrole metabolic process IEP HCCA
BP GO:0033014 tetrapyrrole biosynthetic process IEP HCCA
BP GO:0033365 protein localization to organelle IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0045047 protein targeting to ER IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0051668 localization within membrane IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0070972 protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072594 establishment of protein localization to organelle IEP HCCA
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP HCCA
BP GO:0072657 protein localization to membrane IEP HCCA
BP GO:0090150 establishment of protein localization to membrane IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
MF GO:0140296 general transcription initiation factor binding IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901362 organic cyclic compound biosynthetic process IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006073 GTP-bd 458 578
IPR006169 GTP1_OBG_dom 297 455
IPR015349 OCT_dom 663 731
No external refs found!