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  5. Sacu_v1.1_s0017.g007096

Sacu_v1.1_s0017.g007096


Description : auxiliary factor of DNA methylation pathway *(MORC) & original description: CDS=2529-3164


Gene families : OG0000549 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0017.g007096
Cluster HCCA: Cluster_8

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00085p00139780 evm_27.TU.AmTr_v1... Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species
Ala_g02587 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.03 OrthoFinder output from all 47 species
Lfl_g04201 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.03 OrthoFinder output from all 47 species
Nbi_g04416 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.02 OrthoFinder output from all 47 species
Ppi_g15047 No alias auxiliary factor of DNA methylation pathway *(MORC) &... 0.02 OrthoFinder output from all 47 species
Smo75168 No alias Chromatin organisation.DNA methylation.canonical... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP HCCA
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP HCCA
BP GO:0000398 mRNA splicing, via spliceosome IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005669 transcription factor TFIID complex IEP HCCA
CC GO:0005681 spliceosomal complex IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0008380 RNA splicing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0016832 aldehyde-lyase activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR041006 Morc_S5 307 450
No external refs found!