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  5. Ehy_g06164

Ehy_g06164 (ATPUB17, PUB17)


Aliases : ATPUB17, PUB17

Description : not classified & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Ehy_g06164
Cluster HCCA: Cluster_21

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00267930 evm_27.TU.AmTr_v1... U-box domain-containing protein 19 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AMTR_s00007p00217990 evm_27.TU.AmTr_v1... U-box domain-containing protein 16 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00072p00171260 PUB14, ATPUB14,... Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
AMTR_s00086p00031680 evm_27.TU.AmTr_v1... U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
AT1G29340 ATPUB17, PUB17 plant U-box 17 0.03 OrthoFinder output from all 47 species
AT1G60190 No alias ARM repeat superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G46510 PUB13, ATPUB13 plant U-box 13 0.03 OrthoFinder output from all 47 species
Adi_g017517 ATPUB17, PUB17 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g019046 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g026489 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g05159 PUB12, AtPUB12 not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g09883 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ala_g04410 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g06664 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g07408 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08869 PUB15 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g03799 ATPUB17, PUB17 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g07222 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g16049 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g16594 PUB14, ATPUB14 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g01685 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g17483 PUB15 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g19238 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g00484 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g19192 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21703 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43158.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44181.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44183.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44184.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene44185.t1 ATPUB17, PUB17,... E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene65975.t1 PUB8, B80,... E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0110.g045492 ATPUB17, PUB17 not classified & original description: CDS=1-2295 0.03 OrthoFinder output from all 47 species
Cba_g02580 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.08G025000.1 Ceric.08G025000 not classified & original description: pacid=50638405... 0.03 OrthoFinder output from all 47 species
Ceric.10G010200.1 Ceric.10G010200 not classified & original description: pacid=50612946... 0.04 OrthoFinder output from all 47 species
Ceric.10G010300.1 ATPUB17, PUB17,... not classified & original description: pacid=50611933... 0.03 OrthoFinder output from all 47 species
Ceric.13G093000.1 ATPUB17, PUB17,... not classified & original description: pacid=50635700... 0.05 OrthoFinder output from all 47 species
Ceric.26G012900.1 Ceric.26G012900 not classified & original description: pacid=50598948... 0.03 OrthoFinder output from all 47 species
Ceric.35G034600.1 PUB18, ATPUB18,... not classified & original description: pacid=50581001... 0.03 OrthoFinder output from all 47 species
Dac_g02154 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g32706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g35977 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g39000 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g45484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15895 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26575 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02285 ATPUB17, PUB17 E3 ubiquitin ligase *(PUB8) & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g02800 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11164 PUB12, AtPUB12 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13215 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g22153 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.07 OrthoFinder output from all 47 species
GSVIVT01009347001 No alias U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01016225001 PUB14, ATPUB14 U-box domain-containing protein 14 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01020229001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
GSVIVT01021265001 ATPUB17, PUB17 U-box domain-containing protein 17 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01030205001 No alias U-box domain-containing protein 16 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01036669001 No alias U-box domain-containing protein 4 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_10627 PUB8, B80 U-box domain-containing protein 13 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Gb_29276 ATPUB17, PUB17 E3 ubiquitin ligase (PUB) 0.05 OrthoFinder output from all 47 species
LOC_Os01g72600.1 LOC_Os01g72600 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os05g39930.1 LOC_Os05g39930 U-box domain-containing protein 16 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
LOC_Os08g04470.1 PUB8, B80, LOC_Os08g04470 U-box domain-containing protein 8 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Len_g08985 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g20959 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
MA_129765g0010 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula... 0.02 OrthoFinder output from all 47 species
MA_9917294g0010 ATPUB17, PUB17 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Mp5g12560.1 PUB13, ATPUB13 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Msp_g01206 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g16068 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31758 PUB8, B80 E3 ubiquitin ligase *(PUB8) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g07136 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g38088 ATPUB17, PUB17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05165 ATPUB17, PUB17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g25617 ATPUB17, PUB17 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g00381 ATPUB17, PUB17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11295 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12553 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g30213 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g35847 PUB14, ATPUB14 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g38766 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g00828 PUB12, AtPUB12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g17953 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g01237 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g30958 PUB13, ATPUB13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003607 ATPUB17, PUB17 not classified & original description: CDS=1-2595 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020568 PUB13, ATPUB13 E3 ubiquitin ligase & original description: CDS=347-2224 0.02 OrthoFinder output from all 47 species
Sam_g39035 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Smo415326 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
Smo75609 ATPUB17, PUB17 U-box domain-containing protein 1 OS=Medicago truncatula 0.02 OrthoFinder output from all 47 species
Solyc01g096460.2.1 Solyc01g096460 U-box domain-containing protein 4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc02g072080.1.1 ATPUB17, PUB17,... U-box domain-containing protein 17 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Solyc03g114160.1.1 Solyc03g114160 E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Solyc04g077850.3.1 Solyc04g077850 U-box domain-containing protein 4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Solyc05g005670.1.1 Solyc05g005670 E3 ubiquitin ligase (PUB) 0.02 OrthoFinder output from all 47 species
Solyc06g076040.3.1 PUB13, ATPUB13,... E3 ubiquitin ligase (PUB) 0.03 OrthoFinder output from all 47 species
Solyc12g088360.2.1 Solyc12g088360 U-box domain-containing protein 4 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
Spa_g05552 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g07376 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g07392 PUB15 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g08558 ATPUB17, PUB17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g12131 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14209 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g25117 PUB14, ATPUB14 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g01104 No alias E3 ubiquiTin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g02458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07352 ATPUB17, PUB17 E3 ubiquiTin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e018578_P001 Zm00001e018578 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e019429_P001 Zm00001e019429 U-box domain-containing protein 16 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e028839_P001 Zm00001e028839 U-box domain-containing protein 16 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e031915_P001 Zm00001e031915 U-box domain-containing protein 16 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e034012_P001 Zm00001e034012 E3 ubiquitin ligase (PUB) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009605 response to external stimulus IEP HCCA
BP GO:0009606 tropism IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010274 hydrotropism IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 789 826
IPR003613 Ubox_domain 649 719
No external refs found!