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  5. Sacu_v1.1_s0015.g006521

Sacu_v1.1_s0015.g006521


Description : component *(TAH18) of cytosolic CIA system assembly phase & original description: CDS=121-2007


Gene families : OG0004674 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004674_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0015.g006521
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
Dcu_g07657 No alias component *(TAH18) of cytosolic CIA system assembly... 0.02 OrthoFinder output from all 47 species
Ehy_g13652 No alias component *(TAH18) of cytosolic CIA system assembly... 0.03 OrthoFinder output from all 47 species
GSVIVT01031054001 No alias Coenzyme metabolism.iron-sulfur cluster assembly... 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0010181 FMN binding IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006417 regulation of translation IEP HCCA
BP GO:0006448 regulation of translational elongation IEP HCCA
BP GO:0006488 dolichol-linked oligosaccharide biosynthetic process IEP HCCA
BP GO:0006490 oligosaccharide-lipid intermediate biosynthetic process IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0006914 autophagy IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0010608 post-transcriptional regulation of gene expression IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0017182 peptidyl-diphthamide metabolic process IEP HCCA
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP HCCA
BP GO:0018202 peptidyl-histidine modification IEP HCCA
CC GO:0030119 AP-type membrane coat adaptor complex IEP HCCA
CC GO:0032039 integrator complex IEP HCCA
BP GO:0034248 regulation of amide metabolic process IEP HCCA
BP GO:0043248 proteasome assembly IEP HCCA
CC GO:0044599 AP-5 adaptor complex IEP HCCA
BP GO:0051246 regulation of protein metabolic process IEP HCCA
BP GO:0061919 process utilizing autophagic mechanism IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0090560 2-(3-amino-3-carboxypropyl)histidine synthase activity IEP HCCA
BP GO:1900247 regulation of cytoplasmic translational elongation IEP HCCA
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008254 Flavodoxin/NO_synth 52 152
IPR003097 CysJ-like_FAD-binding 229 443
IPR001433 OxRdtase_FAD/NAD-bd 476 590
No external refs found!