Sacu_v1.1_s0012.g005580


Description : not classified & original description: CDS=1-747


Gene families : OG0001067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001067_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0012.g005580

Target Alias Description ECC score Gene Family Method Actions
Cba_g03750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g43240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000439 transcription factor TFIIH core complex IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003724 RNA helicase activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006289 nucleotide-excision repair IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008186 ATP-dependent activity, acting on RNA IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA

No InterPro domains available for this sequence

No external refs found!