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Description : GARP subgroup PHL transcription factor & original description: CDS=178-1497
Gene families : OG0000036 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00013790 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00022p00190540 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00044p00042560 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00061p00095620 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G13040 | No alias | myb-like HTH transcriptional regulator family protein | 0.02 | OrthoFinder output from all 47 species | |
| AT4G13640 | UNE16 | Homeodomain-like superfamily protein | 0.03 | OrthoFinder output from all 47 species | |
| Als_g42445 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g40723 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene48429.t1 | Aspi01Gene48429 | GARP subgroup PHL transcription factor & original... | 0.01 | OrthoFinder output from all 47 species | |
| Aspi01Gene55088.t1 | Aspi01Gene55088 | GARP subgroup PHL transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g21846 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.31G067100.1 | Ceric.31G067100 | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g26187 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g08285 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g14665 | No alias | transcription factor *(CLAUSA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01029458001 | No alias | RNA biosynthesis.transcriptional activation.MYB... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_25991 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Gb_25992 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Gb_41007 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g04640.1 | LOC_Os02g04640 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g41240.1 | LOC_Os05g41240 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g39550.1 | LOC_Os10g39550 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os11g01480.1 | LOC_Os11g01480 | Putative Myb family transcription factor At1g14600... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os12g01490.1 | LOC_Os12g01490 | Putative Myb family transcription factor At1g14600... | 0.02 | OrthoFinder output from all 47 species | |
| Lfl_g06998 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| MA_138039g0010 | KAN2 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_218023g0010 | No alias | no hits & (original description: none) | 0.02 | OrthoFinder output from all 47 species | |
| MA_52379g0010 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_8183372g0010 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| MA_937875g0010 | No alias | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Mp4g01560.1 | No alias | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Msp_g11105 | PHR1, AtPHR1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g15270 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g00386 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g10253 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g43900 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g44869 | PHL1 | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g05922 | No alias | transcription factor *(CLAUSA) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g26432 | No alias | GARP subgroup PHL transcription factor & original... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12596 | No alias | transcription factor *(CLAUSA) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g18448 | No alias | KANADI-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc04g008480.2.1 | Solyc04g008480 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g079600.3.1 | KAN4, ATS, Solyc04g079600 | G2-like GARP transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Solyc06g066180.4.1 | Solyc06g066180 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Solyc09g091880.4.1 | Solyc09g091880 | G2-like GARP transcription factor. transcription factor (PHR1) | 0.02 | OrthoFinder output from all 47 species | |
| Solyc10g076460.2.1 | Solyc10g076460 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Solyc12g098370.2.1 | Solyc12g098370 | G2-like GARP transcription factor. transcription factor (PHR1) | 0.02 | OrthoFinder output from all 47 species | |
| Spa_g14687 | No alias | transcription factor *(CLAUSA) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g01742 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g14987 | No alias | GARP subgroup PHL transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e003093_P001 | KAN4, ATS, Zm00001e003093 | G2-like GARP transcription factor | 0.01 | OrthoFinder output from all 47 species | |
| Zm00001e027318_P001 | Zm00001e027318 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e030689_P002 | Zm00001e030689 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e031978_P001 | Zm00001e031978 | G2-like GARP transcription factor | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e037761_P001 | Zm00001e037761 | G2-like GARP transcription factor | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e041450_P001 | Zm00001e041450 | no hits & (original description: none) | 0.01 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004842 | ubiquitin-protein transferase activity | IEP | HCCA |
| BP | GO:0006457 | protein folding | IEP | HCCA |
| BP | GO:0006888 | endoplasmic reticulum to Golgi vesicle-mediated transport | IEP | HCCA |
| BP | GO:0008104 | protein localization | IEP | HCCA |
| BP | GO:0015031 | protein transport | IEP | HCCA |
| MF | GO:0019787 | ubiquitin-like protein transferase activity | IEP | HCCA |
| CC | GO:0030117 | membrane coat | IEP | HCCA |
| CC | GO:0030120 | vesicle coat | IEP | HCCA |
| CC | GO:0030127 | COPII vesicle coat | IEP | HCCA |
| BP | GO:0033036 | macromolecule localization | IEP | HCCA |
| MF | GO:0044183 | protein folding chaperone | IEP | HCCA |
| BP | GO:0045184 | establishment of protein localization | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| MF | GO:0051082 | unfolded protein binding | IEP | HCCA |
| BP | GO:0051641 | cellular localization | IEP | HCCA |
| MF | GO:0061630 | ubiquitin protein ligase activity | IEP | HCCA |
| MF | GO:0061659 | ubiquitin-like protein ligase activity | IEP | HCCA |
| BP | GO:0070727 | cellular macromolecule localization | IEP | HCCA |
| BP | GO:0071702 | organic substance transport | IEP | HCCA |
| BP | GO:0071705 | nitrogen compound transport | IEP | HCCA |
| MF | GO:0140662 | ATP-dependent protein folding chaperone | IEP | HCCA |
| No external refs found! |