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  5. Sacu_v1.1_s0011.g005240

Sacu_v1.1_s0011.g005240 (AGD2)


Aliases : AGD2

Description : not classified & original description: CDS=104-1486


Gene families : OG0001991 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001991_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005240
Cluster HCCA: Cluster_32

Target Alias Description ECC score Gene Family Method Actions
MA_119546g0010 AGD2 Probable LL-diaminopimelate aminotransferase,... 0.02 OrthoFinder output from all 47 species
Spa_g13147 AGD2 LL-diaminopimelate aminotransferase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0009058 biosynthetic process IEA Interproscan
MF GO:0030170 pyridoxal phosphate binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
MF GO:0004812 aminoacyl-tRNA ligase activity IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP HCCA
BP GO:0043038 amino acid activation IEP HCCA
BP GO:0043039 tRNA aminoacylation IEP HCCA
MF GO:0140101 catalytic activity, acting on a tRNA IEP HCCA
InterPro domains Description Start Stop
IPR004839 Aminotransferase_I/II 152 427
No external refs found!