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  5. Sacu_v1.1_s0011.g005158

Sacu_v1.1_s0011.g005158


Description : not classified & original description: CDS=96-1199


Gene families : OG0005855 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005855_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005158
Cluster HCCA: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
Adi_g059728 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15581 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g01309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01038579001 No alias No description available 0.05 OrthoFinder output from all 47 species
MA_100327g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g12111 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g12443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g17740 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Spa_g17209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP HCCA
BP GO:0000097 sulfur amino acid biosynthetic process IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0004312 fatty acid synthase activity IEP HCCA
MF GO:0004888 transmembrane signaling receptor activity IEP HCCA
MF GO:0004970 ionotropic glutamate receptor activity IEP HCCA
MF GO:0005230 extracellular ligand-gated monoatomic ion channel activity IEP HCCA
BP GO:0006555 methionine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008066 glutamate receptor activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0009066 aspartate family amino acid metabolic process IEP HCCA
BP GO:0009067 aspartate family amino acid biosynthetic process IEP HCCA
BP GO:0009086 methionine biosynthetic process IEP HCCA
MF GO:0009922 fatty acid elongase activity IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0015276 ligand-gated monoatomic ion channel activity IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0022824 transmitter-gated monoatomic ion channel activity IEP HCCA
MF GO:0022834 ligand-gated channel activity IEP HCCA
MF GO:0022835 transmitter-gated channel activity IEP HCCA
MF GO:0022836 gated channel activity IEP HCCA
MF GO:0022839 monoatomic ion gated channel activity IEP HCCA
MF GO:0030594 neurotransmitter receptor activity IEP HCCA
MF GO:0038023 signaling receptor activity IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
MF GO:0042910 xenobiotic transmembrane transporter activity IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
MF GO:0060089 molecular transducer activity IEP HCCA
BP GO:1901607 alpha-amino acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR002048 EF_hand_dom 211 232
IPR002048 EF_hand_dom 172 188
IPR002048 EF_hand_dom 327 342
IPR002048 EF_hand_dom 256 270
No external refs found!