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  5. Sacu_v1.1_s0011.g005145

Sacu_v1.1_s0011.g005145


Description : not classified & original description: CDS=1-3426


Gene families : OG0000514 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000514_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sacu_v1.1_s0011.g005145

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00141920 evm_27.TU.AmTr_v1... No description available 0.05 OrthoFinder output from all 47 species
AT3G48050 No alias BAH domain ;TFIIS helical bundle-like domain 0.08 OrthoFinder output from all 47 species
AT3G48060 No alias BAH domain ;TFIIS helical bundle-like domain 0.05 OrthoFinder output from all 47 species
AT4G24200 No alias Transcription elongation factor (TFIIS) family protein 0.03 OrthoFinder output from all 47 species
Adi_g005148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g078018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097046 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20600 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Als_g18826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33736 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Aob_g02378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g03624 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Aob_g17691 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.08 OrthoFinder output from all 47 species
Aspi01Gene22277.t1 Aspi01Gene22277 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40551.t1 Aspi01Gene40551 regulatory protein *(SUO) of miRNA bioGenesis pathway &... 0.04 OrthoFinder output from all 47 species
Aspi01Gene70689.t1 Aspi01Gene70689 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0100.g044240 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.05 OrthoFinder output from all 47 species
Cba_g13903 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20508 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G029300.1 Ceric.02G029300 not classified & original description: pacid=50584188... 0.03 OrthoFinder output from all 47 species
Ceric.04G080100.1 Ceric.04G080100 not classified & original description: pacid=50631023... 0.03 OrthoFinder output from all 47 species
Ceric.11G079200.1 Ceric.11G079200 not classified & original description: pacid=50595155... 0.04 OrthoFinder output from all 47 species
Ceric.24G078000.1 Ceric.24G078000 regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.08 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001215.1 No alias No description available 0.01 OrthoFinder output from all 47 species
Dac_g15540 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Ehy_g04880 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07123 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15177 No alias PSY precursor polypeptide & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g18043 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g29630 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01007806001 No alias No description available 0.1 OrthoFinder output from all 47 species
GSVIVT01024041001 No alias No description available 0.04 OrthoFinder output from all 47 species
Gb_05690 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g50850.2 LOC_Os02g50850 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g11454 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Lfl_g05021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g11979 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
MA_10432920g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_39143g0020 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_9406338g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g15696 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Ore_g00447 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g13168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25799 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.02 OrthoFinder output from all 47 species
Pir_g06454 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Pir_g13634 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Pir_g16607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g27613 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31632 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0078.g017727 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Sam_g04139 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g04915 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g10559 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29218 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.04 OrthoFinder output from all 47 species
Sam_g36177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo440870 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc03g114060.3.1 Solyc03g114060 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc06g071350.4.1 Solyc06g071350 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc12g089320.3.1 Solyc12g089320 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g12816 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g13966 No alias regulatory protein *(SUO) of miRNA biogenesis pathway &... 0.03 OrthoFinder output from all 47 species
Tin_g21836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e002441_P003 Zm00001e002441 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e037792_P001 Zm00001e037792 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004525 ribonuclease III activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0004843 cysteine-type deubiquitinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005875 microtubule associated complex IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0008569 minus-end-directed microtubule motor activity IEP HCCA
CC GO:0016459 myosin complex IEP HCCA
BP GO:0016579 protein deubiquitination IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP HCCA
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP HCCA
MF GO:0019783 ubiquitin-like protein peptidase activity IEP HCCA
CC GO:0030286 dynein complex IEP HCCA
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0070646 protein modification by small protein removal IEP HCCA
MF GO:0101005 deubiquitinase activity IEP HCCA
MF GO:0140098 catalytic activity, acting on RNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
InterPro domains Description Start Stop
IPR017923 TFIIS_N 143 191
No external refs found!